Genomic Location: NC_058069.1:15494694...15518215
NR annotation: XP_044174690.1, uncharacterized protein LOC114949010 isoform X6 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044174690.1 |
| Protein |
| XP_044174690.1 |
| UniProt accession | Description |
|---|---|
| Q498E6 | N-lysine methyltransferase KMT5A-B OS=Xenopus laevis OX=8355 GN=kmt5a-b PE=1 SV=1 |
| Q9EP97 | Sentrin-specific protease 3 OS=Mus musculus OX=10090 GN=Senp3 PE=1 SV=1 |
| Q9H4L4 | Sentrin-specific protease 3 OS=Homo sapiens OX=9606 GN=SENP3 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000276 (this species only) |
| Ubiquitin family | DUB|ULP|ULP · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02902 all species → | Peptidase_C48 | Ulp1 protease family, C-terminal catalytic domain | Domain | Interproscan |
| PF00856 all species → | SET | SET domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003653 all species → | Domain | Ulp1 protease family, C-terminal catalytic domain | Interproscan |
| IPR038765 all species → | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR046341 all species → | Homologous_superfamily | SET domain superfamily | Interproscan |
| IPR001214 all species → | Domain | SET domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33480 all species → | SET DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008234 all species → | Molecular Function | cysteine-type peptidase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
XP_044174690.1.Transcript abundance of XP_044174690.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
