Gene detail

Detailed information of XP_044174930.1 in Acropora millepora

Genomic Location: NC_058066.1:2903347...2917133
NR annotation: XP_044174930.1, actin-related protein 5-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044174930.1

ATGGCGGACGAAGATGATCGTACGTTCATGTTTAAAGATTATGAAACATCACCAGACACTTTCTATGATTACACGTCAAGTATACGAGATCATTCTGTACCTCTTATTATTGACAATGGTGGCCACCAGTGTCGAGCTGGCTGGGCCATGGACAATAAACCCAGATTGATCTTCAGAAACCTGGTAGCTAAGGCGAGAAGTAAAAAGGAAGGGGACTCAGCTGGTAATAGCTACTCTGTTGGCAACGATATTGGCAATCTTGAAATGGTCAGATGGGCCTTGCGTAGCCAGTTTGATAGAGATGTGGTCACACACTATGAATGTCAGGAGCAAGTCTTTGATCATGTTTTCAGTCACTTGGGTATCAACACTCCTGGAAAAGTCAATCATCCCATAGTTTTGACCGAACCTGTCTGCAATCCCAACTACTGCAGACAAGCGATGTCTGAGCTCTTATTTGAGTGTTACAATGTTCCTAGTGTTGCATATGGCATTGACAGCCTCTTCAGTTTGTACAACAACATTCCAAATTCAGATAAAACCACTGCACTGATTGTGTCCTCCAGCTGCAATGTCAGCCATGTTCTGCCTGTTGTAAAAGGAAGACTTGATGCTAGCAACTGTAAAAGGATAAATTTGGGTGGGGCTCATGCCACGTGGTACATGCAGCGACTGTTGCAGCTTAAGCATCCTCATCATAATCAGCAAATCACACTTTCAAGAGCACAGGAATTAGTTCATGGCTACACCTCTATGGCTATAGATTACTCTAATGAGCTGGAGAAATGGGCATCGACTGACTATTACGATGATCATGTGAATAAAATACAATTACCATATGCACAGGTACAGGCCCCACAAAACAGCGGCACAAAAAATGAAGAAAAGGAAAAAATGAGGAGGCAGAAACAGGGACGGAGGTTGCAAGAAATCAATGCAAGAAGAAGAGAGGAGAAGTTGGCAGAGGAAGAGGAGAGATTGCAAGATCTTATGAATATCCAAGCTCTGGAACTGGAAAACAAGAATGAGTTTCAGAGGTCATTTACGGAAGCAGGATTTCAGAATGCAGAGGCTCTACAAGCTGCAATAAAAAACCTGACCGCTTCAATCAGGAAACGGAAAGAGAAGATTGTGGCGATGCAAACCGCCTTAGAGCTCGACTCAGAGGTAAAAGAGAAAGATGATATCATTGATGTTGTGTCGGACCAACCAATAACCGAGAGCAAAAAGAGACAGCGGACACCTAAAGGAGCCGCAGAAGACAAGAGCGCGAAGAAGTTGAAGGAAGACAAAAAACAGTTGCAGCAGAAAAGTCACGAAGAATTACAACGAGAGGAAACGTTTAAGTCATGGCTCACGGGCTTGCATAAGAGAAGAAAAGAAATACTTGACGCTCGCCAGCAGCGCGCTCAAAGAAGAGAAGATCTGGCGAGTCGACGGAGCCATGCATCACTCGAAAGAATGAGACTTCTGTCGCAACTGGCGTATGATCCAAACGTTCGAGACGATGGTACTACGAGAATCACGAACAAGAAACCGAAGGAAGACACGTTTGGACAAAATGACGAGGACTGGATGGTGTATAGATCCATTAACAAAGATGCTGGTGATTCTGACAGCGAAAAGGAACAAGAAGAACTAAACGAGTTAGAAAATTTACTCAAGAAACACGATCCGGATTTTTCGAAGCGTTTTGGTGGCAAACCAGAAACCGCTGTGGATTGGGCTGAGTATTATCAGCTGCATCTTGGAGTTGAAAGAATAAGGGTTCCAGAAATTGTGTATCAGCCTTCAATGCTGGGTATCGAGCAAGCTGGTATTGCGGAAACGATAGACTTTATTCTCAACCATTTTCACGCGGAATTACAAACAGCTTTAGTGCAGAATATTTTCGTGACAGGAGGAAACACACAATTTCCGAAGTTTCAAGAACGTTTGGAAAGAGAGCTGTTAGCCATCCGACCATTCCAGTCTACATTTAGAGTTACCACTGCAGCCAATCCGGCGCTTGACGCATGGTGTGGAGCGCGCAAGTGGGCGAGATCAATGAGCGGGAATCTTAAGACAGTCAGTGTCACAAGGCAGGAGTACGAGGAAAAAGGAGGAGAGTATCTCAAAGAACACTTTGCGTCAAATCTTTATGTACCCACGCCTTCCTTGTCGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q17GZ9	Actin-related protein 5 OS=Aedes aegypti OX=7159 GN=Arp5 PE=3 SV=1
Q5ZJA4	Actin-related protein 5 OS=Gallus gallus OX=9031 GN=ACTR5 PE=2 SV=1
Q80US4	Actin-related protein 5 OS=Mus musculus OX=10090 GN=Actr5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004603 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00022 all species →	Actin	Actin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043129 all species →	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan
IPR004000 all species →	Family	Actin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11937 all species →	ACTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0031011 all species →	Cellular Component	Ino80 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11672	ACTR5, ARP5, INO80M; actin-related protein 5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.