Genomic Location: NC_058066.1:5003016...5010888
NR annotation: XP_044175666.1, abasic site processing protein HMCES-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044175666.1 |
| Protein |
| XP_044175666.1 |
| UniProt accession | Description |
|---|---|
| Q5XIJ1 | Abasic site processing protein HMCES OS=Rattus norvegicus OX=10116 GN=Hmces PE=2 SV=1 |
| Q6P7N4 | Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1 |
| Q96FZ2 | Abasic site processing protein HMCES OS=Homo sapiens OX=9606 GN=HMCES PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007145 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02586 all species → | SRAP | SOS response associated peptidase (SRAP) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003738 all species → | Family | SOS response associated peptidase (SRAP) | Interproscan |
| IPR036590 all species → | Homologous_superfamily | SOS response associated peptidase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13604 all species → | DC12-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003697 all species → | Molecular Function | single-stranded DNA binding | Interproscan |
| GO:0006974 all species → | Biological Process | DNA damage response | Interproscan |
| GO:0106300 all species → | Biological Process | protein-DNA covalent cross-linking repair | Interproscan |
XP_044175666.1.Transcript abundance of XP_044175666.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
