Genomic Location: NC_058069.1:5933771...5963444
NR annotation: XP_044175876.1, uncharacterized protein LOC114955557 isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044175877.1 |
| Protein |
| XP_044175877.1 |
| UniProt accession | Description |
|---|---|
| O34313 | Trifunctional nucleotide phosphoesterase protein YfkN OS=Bacillus subtilis (strain 168) OX=224308 GN=yfkN PE=1 SV=1 |
| Q8YAJ5 | Cell wall protein Lmo0130 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=lmo0130 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002792 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12796 all species → | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF00149 all species → | Metallophos | Calcineurin-like phosphoesterase | Domain | Interproscan |
| PF02872 all species → | 5_nucleotid_C | 5'-nucleotidase, C-terminal domain | Domain | Interproscan |
| PF00023 all species → | Ank | Ankyrin repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041821 all species → | Domain | CG11883-like, N-terminal metallophosphatase domain | Interproscan |
| IPR002110 all species → | Repeat | Ankyrin repeat | Interproscan |
| IPR004843 all species → | Domain | Calcineurin-like phosphoesterase domain, ApaH type | Interproscan |
| IPR006179 all species → | Family | 5'-Nucleotidase/apyrase | Interproscan |
| IPR029052 all species → | Homologous_superfamily | Metallo-dependent phosphatase-like | Interproscan |
| IPR036907 all species → | Homologous_superfamily | 5'-Nucleotidase, C-terminal domain superfamily | Interproscan |
| IPR036770 all species → | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR008334 all species → | Domain | 5'-Nucleotidase, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11575 all species → | 5'-NUCLEOTIDASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| GO:0009166 all species → | Biological Process | nucleotide catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01081 | E3.1.3.5; 5'-nucleotidase | EC:3.1.3.5 | Nicotinate and nicotinamide metabolism | ko00760 | deepkoala |
Transcript abundance of XP_044175877.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
