Gene detail

Detailed information of XP_044176099.1 in Acropora millepora

Genomic Location: NC_058066.1:20481083...20589622
NR annotation: XP_044176099.1, NACHT, LRR and PYD domains-containing protein 12-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044176099.1

ATGAAAAGAGGATTAATTGAAGGGAATGAGCATGAGCAACCAGCAGGCTTAGATGAGAGTGTGTCATTCAAGCCTGGGACCCTTTCAGAAGAGGATGTTCTTATCATTGCGCATGAGCTTGGTCCTTCATGGAAAATGTTTGGCCGAGTGCTGAAAGTCCCGAATGCTGAGATTGATCAGATCGAAGTAAACGAGTCCGATGTCACTGAAAAATGCTATTGTGTTCTAAGACGTTGGCAAGATAGGTACCCATATGATGCAACATACCACTGCTTGGCACGTGCATTGCAGCATCCCGCTGTTGGACGAGCAGATTTGGCTGCCAAGTACTGCGTTCTTCAATTAGGAACTTCCTCTGAGCCTGAGAACACAGCACAGGCAATAGAAGCAAGGGAGCCGAAGGGGAACAAGGACTTTACAGGCCTCTCTTCATGTGTTCCACCCAAAAGAAAAAGAGGAATTGAAAAGAATGAGACTGAGCAGCCAGCAGCTCGTACTTCGTGGCCAAGCCAGATCATAGAACGGATACGAGAAGTTTCCCAGAAGTGTGAAGGGGTGATTTTGCCAGTTCCATGGTGTGAAGAGTTCAGCTTTGACATAAAGGACATTTTTACCAGACTTAGAATAGTTGAAAAGGAAAGGACACGCGGAATAGCGACCTCAAAAGAAGTCACCAGCATGACAAATATCTTTACACCACATGACGGTTGCGAACAACCAGCGATTGTGTTGATTGAAGGCGACCCCGGCATGGGAAAGACTACCTATTGCCAAAAACTGGTATATGATTGGGCAAGCAGACAATGTTGCGAATGGGACGGGTCGTTTCCTAGAATTGATGTGCTCCTGCTCCTCAGATGTCGTGAAATCAAATCTGGTAACCTTTGGGACGCTATTGAAGATCAAATTCTGCCAAAAGAAATTGCACCGGAGGCAAGAAAAATGTTTTTTCAATTCGTGAAAGAAAATCCGTCTAAGGTGTTGCTTGTGCTCGATGGGTTGGATGAGGCAGACCCACAAAAACTCGAAATGTACTTGGAACTTGTTAAAAGGAAGGAGCTTCCTGGCTGTTACATTGTTCTCACATCTCGCCAGGAAGGAGGGAGTAGAGTGAGGCGGTACACCGATACATTGTTAGAGATTGTGGGATTCACACCGACTGATGCGGAGAGTTACATTAGAAAGTATTTTAAACAAGACAAAGCACACTTGGCAGAGAAACTTATTTCAAAATTTCTGTTTCATCAGGAATTAAGGGAACTAACACAAAACCCGTTAAACACTCTTCTGCTGTGTGTTATCTTTGAGGATTTAGAGGGAGTTCTACCAAACAGCAGGACGCAGCTTTACATGGAGATCGTTCTCTTTATTTTGAGACGTTATGAAAGCAAGGAAGGCTTATCAAATAGAGGTAAAGACCTTTTATTAGTTTACAAGAAGGAACTAATGACCCTAGGAAGAGCTGCGCTAGATTCTCTGCGTAAACAAGAGCTGTATTTCGATGACCACAAAGGGGATATCAAGGAAAGTTTGTTGATGAAGTTTGGGTTTCTCTCGATCCAGTCTGGTGTTAGCAAGAGAGCTCCTTGTGACCGTTATGGATTTTTTCACAAGAGTTTTCAAGAATTCTTTTCTGGTTACTTCCTTGCCTTTTCTATTATTGATGATGTTGCGAACTGTCAGTCAGTGCTGACCGATCCTCGATACGTGGATGAACTATTTCAAGTTTTTAAGTTTATGAGTACAATAATAGCCAAGGAATCCGTAGAAACTGCAGTGTCAGTTGTAAAACGTATTGCTTCAATTTTAAATGAGACAGGCCTAACATCTGATAAACTCGTTTCGTACTTAAGCGTTGCTCATTGCTTTATTATCGAATGCAAAACTTTTTCAGGAGACCTTGACACAAAACTTGCTTGTACCTTTGGCCAAAGTCTAGAGTTGGTTAACGTGGTTTTGCACTTGCCCAGTTTTATAAGAACGTGGTATATTGGGACGTTTTTCAAGGCCCTCGCCGTTAATTCCACCGTGAGAAACTTGGAGTTGTGTAACGAGACTTTAAGTACTGAGGATATCAAACTGCTTACCGAGGCCCTCACAGTAAATACGTCTCTTTTTTCTTTGAATTTGTCTGAGAGCTTCATTGGTGATGAAGGAGCAAACTTACTTGCTCAGGCACTCAGAGTAAACACCTCTCTTTCTTCTTTGGATTTGCGTTCTAATTCCATTCGTGATGAGGGATTAAATTCACTTGCTCAGGCCCTTAGAGTAAACACCTCTCTTTCATCTTTTAATTTGTCTTACAACTTTATTGGTGATGAGGGAGCAAATTTACTTGCTCAGGTCCTCAGAGTGAACGCCTATCTCTCTTCTTTGAATTTGTCTTGCAGCTCCATTGGTGATGAGGGAGCAAATTCACTTTCTCAGGCTCTCAGAGTAAACACCTCTCTCTCTTCTTTAAATTTGTCCCACAGCACCATTGGTGAGAAGGGGGCAAATTCACTTTCTCAGGCTCTCAGACTAAACACCTCTCTCTCTTCTTTAAATTTGTCCCACAACACCATTGGTGAGAAGGGAGCAAATTCACTTGCTCAGGTCCTCAGAGTAAACACCTCTCTCTCTTCTTTGAATTTGTCTTTCAACTCCATTGGTGAGAAGGGGGCAAATTCACTTTCTCAGGCTCTCAGAGTAAACACCTCTCTCTCTTCTTTGAATTTGTCTTTAAACTCCATTGGTGATAAGGGAGCAAATTCACTTGCTTTTCCGTGTAATCTTGTACCTTCGCATCTTCTGTACGATTGCGTTAACACGAGCAATGTTGAATGTCGCGGGAAAATTTGCTGTATTATGGGAGGTAATGAAATCATTTGTAGATCAACAACGATGGCGTAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000025 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF00531 all species →	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46312 all species →	NACHT DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044176099.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.