Gene detail

Detailed information of XP_044177537.1 in Acropora millepora

Genomic Location: NC_058070.1:27795955...27801625
NR annotation: XP_044177536.1, cilia- and flagella-associated protein 410-like isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8C6G1	Cilia- and flagella-associated protein 410 OS=Mus musculus OX=10090 GN=Cfap410 PE=1 SV=1
O43822	Cilia- and flagella-associated protein 410 OS=Homo sapiens OX=9606 GN=CFAP410 PE=1 SV=1
P34390	Uncharacterized protein F09G8.5 OS=Caenorhabditis elegans OX=6239 GN=F09G8.5 PE=4 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006545 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19252 all species →	HIND	HIND motif	Motif	Interproscan
PF12799 all species →	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR045347 all species →	Conserved_site	HIND motif	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR025875 all species →	Repeat	Leucine rich repeat 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18849 all species →	LEUCINE RICH REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0046540 all species →	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007010 all species →	Biological Process	cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23456	CFAP410, C21ORF2; cilla- and flagella-associated protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.