Detailed information of XP_044177612.1 in Acropora millepora

Genomic Location: NC_058070.1:28634941...28638885
NR annotation: XP_044177611.1, nucleotide-binding oligomerization domain-containing protein 1-like isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
C6FG12Protein NLRC5 OS=Ictalurus punctatus OX=7998 GN=nlrc5 PE=2 SV=1
Q86WI3Protein NLRC5 OS=Homo sapiens OX=9606 GN=NLRC5 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17776
all species →		NLRC4_HD2NLRC4 helical domain HD2DomainInterproscan
PF05729
all species →		NACHTNACHT domainDomainInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038359
all species →		Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR041267
all species →		DomainNACHT, LRR and PYD domains-containing protein, helical domain HD2Interproscan
IPR050637
all species →		FamilyNLRP family, innate immunity and inflammation regulatorsInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007111
all species →		DomainNACHT nucleoside triphosphataseInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45690
all species →		NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_044177612.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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