Gene detail

Detailed information of XP_044177704.1 in Acropora millepora

Genomic Location: NC_058066.1:10282587...10296882
NR annotation: XP_044177704.1, uncharacterized protein LOC114961598 isoform X8 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044177704.1

ATGAAACATCTCCGCGTATTTTCTTTGCCATTTCTTCTGTGTTTTACGTCGGTGATTACCACAGAACGAAGAACCAAACATAAAGGTCACCTGAGTGGGGCAAAATGGCGTTTTACGGATAATGTAACACAAAAGAAGGCGCTTATTCCTGGGATTCCCTCAGGGATACCTGGTCTTACGATTCCAATGGCAGCTGGAAATGCCAGCACTGTCCCTGTAATATCCGGTAACAACTCTCTTGTGCACGCCGCTACAGTCGGAGCTTACGCTGGGGCCCAGGCAGGCGTGTTTAGTGGCGCCAAAGCAGGTGCAAAGACAGGAGCCAAGGCTGGAGCCGAGGCAGGAGCTAAGGCAGGCGAGCAAGCTGGGATCAAGGCTGGAGAAGAGGCTGGCAAAACAATTGCTCACATGATTGCATTGGAAACAGTTCAGAAGCTCTTAATGGCACAAATGCAAAGTGGCCATGTTTTCAATATTTACGGACAACATCCAACTGAAAAGCCAACTGAACCAGCAGGTGGCCAGGGTGGAGCTGCAGGGGCGGGCGGTGCAGGTGCGGCTGCAGGAACGACTGGCACGACTGGTTCGACCGGGTCAGTGGGTGCTGCAGGTTCCACTGGCACAACTGCAGGTGCCGGGGGAGGGGCGGCAGGGGGCGGGGCCGGAGTAGGGGCCGGAGCTGGAGCCGGGGCTGGAGGTGGGTCAGACCCGAATGGTGGTGGTGCTGCGGCAACTGGAGGTGCAGGAGCTACAGCTGGAGCGGAAGCTGGTGCAAATGCCGGTGTAACATCCGGTGTGCCTATTGTGGGAGGCGTCATGGGTGGAAGCCCAAGTGGCAGTTCAAGTGCGGCAGCTGCAGCTGGTGCAGCTGGGATGTCCATAGCTGGTGGAGGGGCACAATCAGGAGGTGCCGCGGGTGCCGTTGCTGCGATATCTGCAGCTGCAATTGCCTCAGCCAACGCGGCTGCAGCAGCATCGGTTTCGGCCAGTGGGGCGGCAACGGCATTTTATCACGGGGCATTGTACTTGATGTACTCCATAAATCATCCCGCAGAAAACGAACAAAACAAAGCCTGCCTCTACGTGAAGGGGGAAGACTTGATGGTGGGATCAAAATGTCAGTACTTCATTGCTCATGTGCCCGGATTCAGTAGGGATCGCGACTCCATCTCCCTAGAGTCTTATTGCAAACGAGGCTATTACCTTCGCCAAAAGAAATACGCTTTTATCCTGGTGCAAACACACGCCAGCTTAAACTTTGGGAGAGACGCGTCGTTCTACATCGGGCGCCGGGTTGAACAGAAAGACACGTTTTCGTTTTCCTTGATTCATAAAGACTGGTACCTGACAATCGCTGATAAAGCTGGTGACGCATGGAGTACCAAGGCTGCTTTTGACAACAGAACACAAGAATTCGCTTTAGATAGCTCGTTCACTGTAATGCCTTACACAATGGATGATCCGCTCAAGAACTGTGAAACAATTGGCCCTCAGGAGCCGAAAGGACCCAACAAGCCTCCAGGGACCCCAGGGTTACCTGGACAACCATCACCCAGTCCACCAGCTAGTGGGTCACCAGGAAGTAAATGCATCGCTCTTCGTTTCGTCAACAGTCTTGGACATCCATTCCAGCTTATTTCACATATGAAGACTGACGGCTGGCGCGTCACAGGAGAGGAATTCAAAATACGATTAACATTTAAAAATCCAGAACTTCACAAATTCATTACCTTTAGAGCGGAAGATCTTTATGGCAAACTTTTACTTCTATTGGATGGCGATAGAACAATCTCTGTCATGCCCAGGGTCAACTGTGATGAATATATTGATGTGACCGTCACTGGAATCCCAGCTCCCACAACGCCAACTCCTGTGACTACTGCGACGCCACCAACGACGGTTGTTCAAACTAGACCAACACCAGCACCTCCACCACCACAGCCAGCGACTTCACCCCCTCCACCCCCACCTCCTCCACCACCTCCTCCCCCTCCTTCCCCACCTCCTCCCCCTCCTCCCCCTGCCGTCCCTACTGCCTCTCCTCCTTCGCCTCCTCCGTACTCAAGTCCACCGCCCATGGCTCCACCAGCGGTAGGAATCCCTCCATCATCTGTTTCTCCTCCAAGACCCCCACCGGCGCCACCAATTCCTCCCCCACCACGCACCGGAGGAAAAGATGTGCACTACCATTTCCACTATCACCCTGAGATTCTCGGCTGCTCTCCAACTCATGGAGGAAACTCCGAGGGAGCGTGCTGCATGTTCCCGTTCACGTACAGTGGACAGCAGTACAGGAGCTGTACAGACGCTGATAGCCAGAAGCTATGGTGCGCGACAACAAAGAACTACGACGACGACAATAAATGGGGATACTGCCAGAATTGCCATGCCACTCACGGTGGAAATTCAGGTGGATCATGCTGCCAGTTCCCCTTTGTATACAACGACATGATTTATCACAAATGCATTCGAGGAAACAGAAAAAAGCCATGGTGTGGTACAACCTTCAGTTACGATAGAGACGGAAAATGGGGTTTTTGCAATGCTCAAGTTGTGGCGCATCCAAAGCCAATGAAAAGTGTTCAACACCACGCCGATCTACCCTGTCCTGGAAAGTGCGAATCGCATTGTGACGACTCTTGTCCAGAGCGCTGTTGTTCCTCAACGAGCTCATGTCCCAAGTATTGTGCTCATTCCTGCAAACCGACCTGTCCAGACGAGTGTTGTACCCTCCCTCTGCCATTAATTCCTCCTGCCTCCCCTCCTCCTCTGCCACCCGCACCACCACCTCCACTTCCACCTCCGATGGCACTACCCCCTCCTCCTCCCCCTCCGCCTATTTACATCCCAGCACCCTATCCCCCTCCTCCACCTTTCTATCAAGTACCAGCTCCGGCTCCACCCCCGACGTATTCAGTAACACTAGGAACGACATCATCATGTCCAGCGATCTGTAACGATGTGTGCATTGGTTCATGCCCAGTGTCTTGCTGCACAAGGTTTCCTCCAATGGCGTCGCAAAGGGTCTTCATTCCTCCAACAGCACCACCTCCACCCCCATATTTTCCGCCAGCTCCAGTTCCACCGGCAGCACCATACTTTCAACCTGAACAGCAGCCCTGGCCAACGATGTGCCCCAGAATTTGCTCGTCAAGATGCGAAAGCTCTTGCCCAATTCATTGCTGTCCAAGCAGCATTTTAGAAAACCTTAAACGTCTATCAAAAACTATGAATCGACACCAAGCCGTGGGAAAATCGTTCACATCTGTCAGTCCGGATAGTAGGCTAAATCCTTTAGATGGCCATAAAGAACCCTCAACTGTCCTTCAACCACCACCTGTTCCTCTATCACCCTTTCTATCCACCTCTTCTACTTCATCCTCGTGTCCCACCATTTGTTCACGGCATTGTACGAGGGCCTGCACACCCGAATGTTGTGTTGCGCCCCCAGTGGCTACACCATCGACACAACTGGAGAAAAGAGACAAGGTGCTGAAAAGAAAGATTATTCGAAAATCAAGGAACCAAAATGGAAAACGTTTAAATCAGGTATCGCATAAGAGGTCATATAAATTGGCTAAAAGCACCGTACCAATGGCTACACTATCAACACACCTGGAGAAAAGAGACAAGGTGCAGAAAAGAAAGAATTTTCGAAAATCAAAGAGCCAAAACGGAAAACGTTTATATCAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P11276	Fibronectin OS=Mus musculus OX=10090 GN=Fn1 PE=1 SV=4
Q28377	Fibronectin OS=Equus caballus OX=9796 GN=FN1 PE=2 SV=3
Q28749	Fibronectin (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=FN1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000377 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00040 all species →	fn2	Fibronectin type II domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR036943 all species →	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR000562 all species →	Domain	Fibronectin type II domain	Interproscan
IPR036195 all species →	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR051666 all species →	Family	Seminal Plasma Capacitation Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918 all species →	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046373 all species →	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556 all species →	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0048240 all species →	Biological Process	sperm capacitation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044177704.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.