Gene detail

Detailed information of XP_044178414.1 in Acropora millepora

Genomic Location: NC_058071.1:1646766...1654092
NR annotation: XP_044178414.1, uncharacterized protein LOC114948745 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044178414.1

ATGTCTTGGTCACAATATTTAACAAACATGTCTTTACAAGGAACATGGGCCAATCATATTATAATACAGGCTGTAGCTGATGCAATGAATCTAAAGATTCATATAATAGAATCAGATTCTAATTATGGAGAGATAACATTGGTTCAACCAGCAAATGCGACATCTGATATTAGATCAATATATATAGGGCATATGGGACAAATGCATTATGTATCAACATGTAATTCATTTGAGCAAGACTCAAATCATAGAAATGCTAATAACATTCAACAAGCTATTCCAAATGATTCAGTACAAAATGAGTTTTCTGAAATAGTCACAGACAAAGATACAGGTATAATTAAAAACAATAGTAATCAAACACAAAAACGTGATAGAGCTGCCTACATGAGACAATACAGGAAACTAAGCAATTCACCAGAAAAACGATTAAAGAGAAATGAGTACTTAAAAAAATACAGAGAAATGAATGCATCACCAGAAAAACGATCAAAGACAAATGAGTACTTAAAAAAATACAGAGAAATAAATGCATCACCAGAAAAAAGACTAAAGACAAATGAGTACCAAAGAGAATATAGACAAGGACATAAAACATCTATGGAATTTGCAATAAACAGATTCCATGAAATTGTAAATCAAGGACCGCTTTATGTTTGCACGTGTTGTGATCAACTATGGTATAAACATAGTGTACGCTGTACCAATAAGCTCAGGCAGTCAAAACCTGACATTGTTAAATATCTATTAAATAAGACAAGTGTTGGAAATAAAGAATGGGTTTGTCAAACATGCTCTAGATATTTAATGAAAAATAAAGTCCCACCATGCTCTATAGCTAATGGTATGGCATTTCCAGTCAAACCAGATTTCTTTGATCTGAATGAATTAGAATGTAGATTAGTGGCACCAAGAATAGCATTTCAAAAATTAATGCAAGCGCCTAGAGGAAGACAACTTAAAATACATGGTAATATTGTTAATGTACCTGCTGACGTCACTCATACAGTTAGTATATTACCAAGATTGCAGAATCAAACAGCTACAATTAAAGTTAACTTAAAGCGAATGTTGACATATAAGAGCTCAGCATTATCACTTAACGTGAGACCATATAAAGTGTTTGAGGCAGCAAACTGGCTAATTTCACATAGTAATCTGTATAAAGATGAGGGTATAATATTGAATAATGACTGGATCAATCAGCACAGCCAAGATGCCAATGATGTAAATAATGATAACAGTAACTTACAGCAAGATACAAGTGATGAAACTAGTGATAATGAAGAAATAATTCATAATGAAATCCCTCAAGATGAGTCAGAAAGTACTGCTGGTGTTACTGACACTATGTTTACAGCAACAGACTTTTTGGAAGATGAAGAAAGGCAAAACATACTAAATATTGCTCCAGGTGAAGGGAATAGACCATTAAGTGTTTTCAGAGACAAATATTGTGAAGAGTTGGCTTACCCTGGAATATTTCTTGGGCAAGCACGTCCTGACAATAAGCAAAGATTAGTTAATATCACCTACAGTGATATCTGTAAATCAGAATTGAGACAATCTGATAGAAGAGCTGCAATGTGCATTGAAAATATATTTTACAAAACAAAAAAGTTGCAAATGAAAATCCTATTAGGAAAGTCGCACATAGCTTTGAGAAAATGCAAGGGTAACAAAAAGATCACAGCAGGACAAATTAAACAGCAAGGAACATTAGATAGATTAATACGTCATGATGATGGATATAAGTTTCTGAATGCATTAAGAGGTTCTCCTCCATACTTTGAAAAGGCAAAAAAAGACTTGTTTGCAATGATAAGACAATTAGGTCCTGCTACACTGTTTTGTAGTTTCTCATCAGCAGAAACACAATGGATACACTTACTACAAATTCTTGGTCAGCTTGTAGACCACAAGGAATACACTGATGAAGAAATAAGCAATTTTAACTGGGATAATAGATGTCGCCTAATTCAGAGTGACCCTGTGACATGTGCTAGACACTTTGATTATCAAGTTAATCAATTTTTGACAAGTTTTTTGTTTAGTTCTGCTGAACCATTAGGTAAAATATCTGACTGGTTTTATAGAGTTGAATATCAACAGAGAGGATCTCCTCATATTCACATGTTACTATGGCTTGAAAATGTACCAAAATTTCAAGAAGATAGTGATAATGATGTGACAGCATTTATTGATAAGATAATAACATGTCAAAAGTCAATAGACAATGTTGAATTGCTTAACCTAGTTAATAGGCAAGTGCATAGACATTCACATACATGTCGTAAAAATACTAGCAGCAAATGTAGATTCAACTACCCACAGCCTCCAATGAAACAAACTATGATACTATATCCTCTAGATGAGGAGACATCAGATAGTGAAATAAGAATGCACAAAAACAATTGGAAATTAATTAAAACTTGTGTAGATGAAAATAAAGATGATGAAGATATTACATTTGATGAATTACTCTCGAAACTGAATATTACAGAAGAAAACTATTTGCTTGCTATAAGATCTTCTTTAAATACACCGACTATATTCCTAAAACGAAATTATAATGAGGTACACATAAATAATTATAACCCTGCCTGCCTTAGTGCATGGAGGGCTAACATGGACATACAGTATGTGTTAGATGTATATGCTTGTGCTGTGTATATAGCTAATTACATATCAAAAGGTCAAAAAGGCATGAGTGACCTTTTGAGAGAGGCTTGCCATGAAGCAAGACAAGGAAACAATAGTATTAAACAACAAGTTAGAGATATTGGAAGTAAATTCCTTAATAATGTTGAAATTAGTGCTCAAGAGGCAGTGTATATAGTATTACAGCTCCCAATGAGAAAATCATCTCGACATATCATATTTATAAATACATCACCTCCTAATGAAAGAGTAGAACTTCTAAAGCCAATGGATGATATTAAAAACATGGAAGATGACTCTGAAGAGATTTACTCTAGCGGGTTGCTGAATAGATATTGCAAGCGACCACAAAAATTAGAAAATCTGACACTTGCAGATTGGGCTGCATGGTATGATTGTGCAGGAAAGCCATACATAAAACAAACTGATGAGCTTGACATTGATGGTTTACCATTAGAGAATTTTATTGATGATAATCAAAATGATGATGAAATAGATGACAAAACAACATGTAGCAAAACTAAAAAAAGAACTAAAGCCAGAATAATACGAAGTGTTTGGTTCAATAAGGAAGCTGAACCAGAAAAACATTACCGTGAACTGTTAATGCTATTTACATCATGGCGTAATGAGGAAACTGATGTACTTGGATCATTTTCTTCCTATCAGGATCGATATATGTTACTTTCTGATGTAATCAATGAACAAATGAAGCAGTATGCTGTATGCAATGAAGATTTCAATGAAATCCAGCAAGAAATGAATAGGATAGAAGACAGGTTTGATGAAATAGCACCTTGCGCACAAAGTCTTGAACAACAAGACAAAGCTGAAGGGGATAAAGACTTACATCCAGATTTTGCTGGAAATTATAATCTGTCAGATGATTTAGGAATACCGTCAGTGAATAATAGTGAACCACTAATAATGAATGAATTACCAGATGATGAATACAGACATATTGTTCAAACATTAAATAAAGAGCAAAAGGAGTTCTTTTATCATGTATTACATTTGATTAAGACCTCTGAAGAACCATTTTACTGTTTTCTTAGTGGTGGTGCAGGTGTAGGTAAATCACATGTTACTAAAGCCTTGTATCAGGCTGCATTAAAGTATTACAATACAAGACCTGGGATTAATTTTAATGAGACAAAAGTATTGATGCTGGCCCCTACAGGTAAAGCAGCATATAATATAAAGGGAAATACTATTCATAGTGCTTTAGCAATACCAGCTTGTCAGTCATTGAAGAACTATAAAAGTCTTGATTCAAGTAGGCTTAACACGCTAAGAAGTCAAATTGGTAGACTAAAACTGATATTCATAGATGAAATATCAATGGTTGGTAACACTATGTTCACAGTACAAATATATAATAGACTTAAAGATATCAAAGGCAGTTCACTACCATTTGGTGGTGTCAGTATAGTTGCTATTGGGGATTTATTCCAACTGCAACCAGTCATGGATGGTTATATATTTAAAAATATGGACAATAATGAATATGGTGTTCTTGCTCCTAATGTGTGGCAAGAACTTTTTAAAATGTTTGAACTCAAACAAATCATGAGACAAAGAGAAAGTAAAGACTTTGCTGAATTATTGAATAGATTAAGAGAAGGAAATCACACTAAACAAGATATTCAGAAATTAAAACAAAGAATTATTAGTATTACTAATCATGAATATCCTAAAGATGCTCCACATGTCTTCATTCAAAATGCCAAAGTGAATGACTTTAATGCTAGAGCACACAATGCTCTTCCAGGTATAAAATACTCTATTAAAGCACACGATAGTGTTATAGGAGCTGATTCACAGCAACTCAGAGATAAGATACTCAGTCAAATACCTAATGACCCTAGAAAAACAAAACAATTGCATTCGGTGCTACAGTTAGCAGTCGGCGAAAGAACAGAGATATCTCTGAATACCAGAACTGATGACGGTATGACTAATGGTGCTGGTAATGTTATCAAATTAATACAAGTACAGCCAACAGGCACACCATCTGGTGTGATATGGGTACAATTTGACCATCCTGATGTTGGTCAAAAAACAAGGCAAGATAATAGACAATTGTACATTAATGGTATTCAACCAACATGGACACCAATTAAACCAATTACAACACAATTTGCTGTTGGGAGAACAAGATCTGTTCAGGTCGTAAGGAAACAGTTCCCACTGAGACCTGCTGCAGCTAAAACTATCCATAGATCACAAGGTGATACTGAATCTAGAATAGTAGTTAACCTCGAAACAAGAAGGGCAATTCCTCACATACATTATGTGGGACTAAGTCGTGTGACAACAATAAATGGTTTATTTATCACAGACCTTTGTGAAGATAAAATAGCTGTGAGTAATGATGTCCAAACAGAGATGCAGCGATTGAGAACAGAAGGGCAGCTGCCACTCTCAATAAAACCCATTTATGAAGCACCAAATAATAGTATCAAAATCTGTTTTCTCAATGCACGATCATTACATAAACACGTAGATGACATACGTCATGACTTGAATTACTTGAGCACTGATGTGAATATTTTCTCAGAGACAAGGTTTTCTCAACTAGATGATGACAATTTATATCATATAAAGGATTACACACTATTCAGGAATGATGGTACAACAAGAGTATCACAAAATACAAGACCTTTTGGAGGCATGGCAGTTTATAGTCATCTTGATTATTATCCAGGATACCCATATTGTGCCAATACAAATGGTGTTGAAATAACTGTTATCAGATTAATGATCATGCCTCATATATCTATAGTGGGTGTATACAGATCACCAGCAGTACCAATTACACTATTGTGTAGTGTTGTCCAGCATATGCTTGATTGTTTGCCAACTCAAGTTAATATTTTTATGGGAGACTTTAATGTAAATTACTTTAATAGCTCACAGAGTGCATCACTCAATAATTTATTTGTAAGAGACAATAATTATAGACAACTGGTTTCAAGCTTTACAACTGACAGAAATACTTGTATTGATCACATCTATACTAATTTGTCTGAATCACAAATACATTTTCAGATTCTAGAAACCTATTTTTCAGATCACAAAACCATTTGTGCATTGGTTAACTTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q59RQ0	ATP-dependent DNA helicase PIF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PIF1 PE=1 SV=2
Q196V4	Uncharacterized protein 106R OS=Invertebrate iridescent virus 3 OX=345201 GN=IIV3-106R PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000131 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05970 all species →	PIF1	PIF1-like helicase	Family	Interproscan
PF14214 all species →	Helitron_like_N	Helitron helicase-like domain at N-terminus	Family	Interproscan
PF20209 all species →	DUF6570	Domain of unknown function (DUF6570)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010285 all species →	Family	DNA helicase Pif1-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051055 all species →	Family	PIF1 DNA helicase	Interproscan
IPR025476 all species →	Domain	Helitron helicase-like domain	Interproscan
IPR046700 all species →	Domain	Domain of unknown function DUF6570	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47642 all species →	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0003678 all species →	Molecular Function	DNA helicase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044178414.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.