Gene detail

Detailed information of XP_044178806.1 in Acropora millepora

Genomic Location: NC_058066.1:12474349...12482608
NR annotation: XP_044178806.1, F-actin-monooxygenase mical1-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044178806.1

ATGGAAAATATGGGTTCGAGCAAAGAAACTGCCGAAGATTTGTTTTTCAAGTTTATGGACGCCGAAGACTGCCCCGAAATAACACAGACATTTAGTCGACTTCTGAAACTTACCAGAATCAAGGCCAACAACTCGCGAGAGTTTTATACGTTACTAAAAGGGAAACTACAAACTTGGCGATGCAAGTCTCTTTGGGAACAACTTGATTGTCGCGCTAATCAAAAAGAATATGGCAAGGGAAAAATATGCGAGGACAATCAAGTTATGATAATCGGCGCTGGTCCCATTGGTTTGAGGACAGCCATAGAAATTGCTTTGCTCGGTGCTCAAGTTGTAATTGTCGAGAAACGAGAATCATTTGTACGGAATAATGTTTTGCATTTGTGGCCTTTTCTTCTCACGGACTTTCGTTCGCTCGGAGCGAAAAAGTTCTACGGAAAGTTTTGTTCTGGTTCCATCGACCATATTAGCATCCGTCGACTTCAAGCCATCCTTCTCAAATGCGCGCTCATTTTTGGCGCCAAGTTGTATACCGGCGTCACGTTTGAACACGTCATCGAGCCGAATTCACCGGAGGATGGATGGAAGAGCAAACTTTCCCCTGACAACCACCCCTTGAATACATTTGAATTTGATGTGCTTATTGGAGCTGATGGAAAGAAAAATGTTCTCCCTGGATTTCAACAGATTGAAATGAGAGGCACACTCGCTATTGGAATTACAGCCAACTTTGTCAACCATGGGACAGAAGAAGAAGCTAACGTAGAGGAAATCTCTGGAATCGCTTATCAGTTTAACCCGCAATTTTTTGACACCCTGTTGGCTGAGAAAGGAATCAAGCTAGAGAATATTGTTTACTACAAAGACGAAACACATTACTTTGTAATGACAGCAGGGAAGGCAAGCTTGATAAAGAGAGGCGCACTCAAACAGGACTTAGGTCAACCCGCCAAACTACTCGCCCCTTCTAATATCGACTCCTCGAAGCTATTGGAATATGTAACTGACGTAGTCAAATATGCCACGAAAGGAACTCTGAGGAACTTGGAGCTGAAAAAGGTCAAAAACAACCAACCTGACATAGCCGCGTTCGACTTCACTTCCATCAAGAAAGCGGAACACGCTGCTAGGATTATAGAAAGAAAAGGAAGTAAACTCTTAGTGGGGCTTGTTGGAGACAGCTTACTGGAGCCATTTTGGCCCACGGGATCAGGTTGTGCCCGCGGTGTGCTGAGTGCTTTGGATGCGGCCTGGATGATCCGGTCATTTGCGCAGGACAAACCGCCGCTTCAAATTCTCAGTGAACGGGAGAACATTTATCGGCTTCTGTCAGGCACCAGTGCAGAAAATCTACAAAAAGACCCCGCTAAATATACCATCAATCCAAGCAGTCGCTATCTGCATATCACACATAAAAAGGTCCGTGAAGTTTACCATCTTTTTGATACTGATGATGCTGTTAACGCGGACTTCAGTCTTGGCAGCCCAGCGACAGATGTCAATGACAAAGCGAGTCGCCGAAGGAGGATCAGCACTGGTGCTAAGCTTACTTCTGCTAAAGGTCGCAAGCGTAGTCTAGCAAACAATCAACTTACCGCAGAAGCTAGGACGAGTAGATTTAGATCTACGTCAGGTTCCAGCTTAGAAAATTTGGATGAACACAAACCACTGAGCGTTTCTCGGTCCGTGCCACTGGACCACCGAAAGAAATCGAACGCGGTCGCAGTGTTGAGTTCAGCGGGAAGCGATGAAGAATTCCTCGACTCAAAATCGAGACGAGTACCGCGAAATGTAGCTATGACAAGCCCGTTGACAGTTCGAGATAGGAGTTCTACTGTGGGAGTTTCCAACGAAGCGCGCAATAGGAAGAGGAAGAAATCAACAACAAAAGAGAAGCTGGAAACTAGAAAAAGCGACCCCACGCGAAGAAAGAAAAGTTTCTTTGCTTTCGGGAGGACTAAATCGAAGCACAGTGCAAACGAACAATCTGATCACCAGTCTGACAAGGGTAGCAATTTGGTAAGGGCGAAACACGACGAGGAACATCATGTTATTGATTCTCGTGAAGACACGTCCAAGACGAAACCCGCGGGACCATTTTCTCGGTCGCAGTACACCCGTAGATCAACTCGAGAAATTGTAAAAGAAATGGAGGCCTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7F9T0	[F-actin]-monooxygenase mical1 OS=Danio rerio OX=7955 GN=mical1 PE=3 SV=1
F1QH17	Protein-methionine sulfoxide oxidase mical3a OS=Danio rerio OX=7955 GN=mical3a PE=2 SV=2
Q8BML1	[F-actin]-monooxygenase MICAL2 OS=Mus musculus OX=10090 GN=Mical2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001591 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01494 all species →	FAD_binding_3	FAD binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR002938 all species →	Domain	FAD-binding domain	Interproscan
IPR050540 all species →	Family	F-actin Monooxygenase Mical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23167 all species →	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044178806.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.