Gene detail

Detailed information of XP_044179768.1 in Acropora millepora

Genomic Location: NC_058066.1:14041528...14064195
NR annotation: XP_044179768.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like isoform X6 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044179768.1

ATGTTTGGAACATCAGACCGCAAGATTTCGCTTTGGTTCATTTTTTCCGCATGGCTATTCACGTTGCGAAATGCGATGGCTGAAAAATGCAACGAAGAACTTGGCATGCGAACAAAAGGAATCCCGGATGAGCGCATTCAAGCATCTACTAATTTAAGTGACAATCATCTTCCCTCTTTCGCGCGACTTGACAACTTTAAAGCTTGGTGCCCAGATCCCTCAGACAAATTACCATATTTACAGATAACATTTGAGGAAGAAAAGATGATGACAGCAATAACCACCCAAGGAAGTAGAGGGGATGGGAGATGGGCACAAAAATTTGAGATCAAGTACATGAATCACATAGGGATATGGGTTCCATATGGAAAGGTTCTTGAAGGTAACACAAACATCGCAGCAAGGAACGAAATTTTACTGCGACCATCGATCGTAACACGATCAGTGCAGATTTATCCAAAGGACCCTCAGGCACTTTTTTTCAATCCAGCAATTGGTGACATTCCATGCCTCAGATTAGAGTTGTACGGATGCTCAGCACCAGCGCCGTGTCCCGACCCTGGCCTGCCTTCCAACGGCAAACGAGACGGATCCGACTTTGGCCACGACCAGACAGTCACGTTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCCTCTAATGGGAAACGAGACAGTTCCAATTTTGGCCATGAGAAGACAGTCATATTCCAGTGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTGTGGAGCGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGCCTACCTTCGAATGGCAAACGAGATGGTTCCGATTTTGGCCATGAAAAGACAGTCACATTCCAGTGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGACTTACCCCAATGCAAAGCGCCGTGTACCGACCCTGGCCTACCTTCCAATGGCAAACGAGACAGTTCCGATTTTGGCCACGACAAGACAGTCACATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCTCAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCCTCTAATGGGAAACGAGACAGTTCCAATTTTGGCCATGAGAAGACAGTCATATTCCAGTGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTGTGGAGCGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCGAATGGGAAACGAGATGGTTCCGATTTTGGCCATGAAAAGACAGTCACATTCCAGTGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGACTTACCCCAATGCAAAGCGCCGTGTACCGACCCTGGCCTACCTTCCAATGGCAAACGAGACAGTTCCGATTTTGGCCACGACAAGACAGTCACATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCTCAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCTTCTAATGGCAAACGAGACGGTTCCGATTTTGGCCATGAGAAGACAGTCACATTCCAGTGCAATGACAAGTACAGTTTAGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCGAATGGCAAACGAGATGGTTCCGATTTTGGCCATGAAAAGACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATAAAAATTTGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTACCGACCCTGGCCTACCTTCCAATGGCAAACGAGACAGTTCCGATTTTGGCCACGACAAGACAGTCACATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCACAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCCTCTAATGGGAAACGAGACAGTTCCAATTTTGGCCATGAGAAGACAGTCATATTCCAGTGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTGTGGAGCGCAGAGTTACCCCAATGCAAAGCGCCGTGTGCCGACCCTGGCCTACCTTCGAATGGGAAACGAGATGGTTCCGATTTTGGCCATGAAAAGACAGTCACATTCCAGTGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGACTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGCCTACCTTCGAATGGGAAACGAGATGGTTCCGATTTTGGCCATGAGAAGACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAACTGCAATGACGGAGTGTGGAGTGCAGAGTTACCTCAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCTTCTAATGGGAAACGAGATGGTTCCGATTTTGGCCATGAGAGGACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTACCGACCCTGGCCTACCTTCGAATAGCAAACGAGACGGTTCCGATTTTGGCCACGACAAGACAGTCACATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCACAATGCAAAGCGCCGTGTGCCGACCCTGGTCTACCCTCTAATGGGAAACGAGACAGTTCCAATTTTGGCCATGAGAAGACAGTCATATTCCAGTGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTGTGGAGCGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCTAATGGGAGACGAGACGGTTCCGATTTTAGCCATGGGAGGACGGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCTAATGGGAGACGAGACGGTTCCGATTTTAGCCATGGGAGGACGGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTCACCCCAATGCAAAGCGCCGTGTGCCGACCCTGGCCTACCTTCGAATGGCAAACGAGACGGTTCCGACTTTGGCCACGACAAGGCAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATAAAAATTTGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTGCCGATCCTGGTCTACCCTCTAATGGGAAACGAGACAGTTCCAATTTTGGCCATGAGAAGACAGTCAAATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGCCTACCTTCGAATGGCAAACGAGACAGTTCCAATTTTGGCCATGATAAGACAGTCATATTCCAGTGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGTAATGACGGAGTATGGAGCGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCTAATGGGAGACGAGACGGTTCCGATTTTAGCCATGGGAGGACGGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTTTACCTTCTAATGGGAGACGAGACGGTTCCGATTTTGGCCATGGGAGGACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCACCGTGTGCCGACCCTGGTCTACCTTCTAATGGGAGACGAGACGGTTCCGATTTTGGCCATGGGAGGACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTTGGAGATGAAAGTATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTACCGACCCTGGCCTACCTTCGAATGGCAAACGAGAGGGTTCCGACTTTGGCCACGACAAGACAGTCACATTCCAATGCAATGACAACTACACTTTGGTGGGAAATGAAAGAATGAGCTGCAATGACGGAGTGTGGAGTGCAGAGTTACCCCAATGCAAAGCGCCGTGTGCCGACCCTGGCCTACCTTCGAATGGCAAACGAGACGGTTCTGATTTTGGCCACGACAAAACAGTCACATTCCAATGCAATGACAAGTACAGTTTGGTGGGAAATGAAAGAATGAGGTGCAATGACGGAGTGTGGAGTGCAAATTTACCTCAATGCAAAGCAAATTGCCACAGGAACAATTCCGACGTTGATAGAAACTGTATTAAGACTTGCTTGTCTGATGACGATTGCCCTGCTAATTGGAAATGTTTATGTGATGGAGACTGTGGGTTGAGTTGTGTTAAGAACAATCTAAAGTGTAAACGACATCCAAGAGGACCCAAATTGAAGTTTCTCAACAATGGCCGTTTATTTGGTAGTATGGTTACTTATTTGTGTCAAGAACCATACATATTGCATGGTTCGCCCAAAAGGACCTGTAGAGCTAACGGAAAATGGGATGGAAAGAGGGCTCGTTGCAGTTTGGGCGATGCGAAATGCGCCAAAATCCTGCTTGGCTTATTGCAAAATCCACCCGACAACACAACAGTCACTATAAACGCCCACCTTTCCATGGCAAGATACCACTGTCATAAAGGTTTCATGTTGGAAGGTAATAATACGCGGTTCTGTAGAAACGGAAGATGGTTGGAGTCTACTGTGCCCTCGTGCAAAGCTTCATCACTTCGCTACACTGCTTGCGGAGAGAGTCCAGTTGATTTCAGAGCTCGAATCATTGGTGGAAACGAATCGCAGAGAGGATGGTGGCCATGGCATGTTGGACTGTACATTAGAAGTGGAGGCAAACTCAACTTGCAATGCGGCGGTGCCTTGATATCGTCTCAATGGGTCTTGACTACAGCTGAATGCGTTACTTCCCATTTGTTACCAGATGAAACCATTAATCCGCTTAATTATGAAATCCGCGCAGGCGACCACAGATTAGACACGATGGAAAACACACAGCAAACAATCTCCGCAGAGAAGATTGTGTATCACCAAGCTTTCGATCCTGATACCTACATGAATGACATAGCTCTCATTAAACTTCAGAAGCCCGCCGAACTTAACAAGTTTGTTCGCGCTGTATGTCTGCCGAGTCAAGACGGAGGCGATTTAGCAATCCCTGGAAAATACGGTTATGCAACAGGATGGGGATACACCAAGGCCAGGGAAGTCAGTTATTCAAATACTCTGCAATACTCTTCTTTTACAATCCAGAGTAATTCAGTGTGCAGGTACAGCACCTCGTATCCCTATTTCTCGAGAGTAATGTTTTGTGCCGGTGATGGTGGTGGTAAAAAAGGCAGCTGCTATGGGGATGCTGGAGGGGCTTTCGTTCGCGAGGAAAAGAGAGGTGATGGTTATCGGTGGGTTGTCACTGGTATTGATAGCTGGGGAGAAGCCTGCGTGCAGAGAAATAAATATGGATACTATACTCGAGTTTATTCATATATTAACTGGATTAACAAGACAGTGAGGGAGAACTGA

Protein

XP_044179768.1

MFGTSDRKISLWFIFSAWLFTLRNAMAEKCNEELGMRTKGIPDERIQASTNLSDNHLPSFARLDNFKAWCPDPSDKLPYLQITFEEEKMMTAITTQGSRGDGRWAQKFEIKYMNHIGIWVPYGKVLEGNTNIAARNEILLRPSIVTRSVQIYPKDPQALFFNPAIGDIPCLRLELYGCSAPAPCPDPGLPSNGKRDGSDFGHDQTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHEKTVIFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDESMSCNDGVWSADLPQCKAPCTDPGLPSNGKRDSSDFGHDKTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHEKTVIFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDESMSCNDGVWSADLPQCKAPCTDPGLPSNGKRDSSDFGHDKTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDKNLSCNDGVWSAELPQCKAPCTDPGLPSNGKRDSSDFGHDKTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHEKTVIFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDESMSCNDGVWSADLPQCKAPCADPGLPSNGKRDGSDFGHEKTVTFQCNDKYSLVGDESMNCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHERTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCTDPGLPSNSKRDGSDFGHDKTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHEKTVIFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGRRDGSDFSHGRTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCADPGLPSNGRRDGSDFSHGRTVTFQCNDKYSLVGDESMSCNDGVWSAESPQCKAPCADPGLPSNGKRDGSDFGHDKAVTFQCNDKYSLVGDKNLSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHEKTVKFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDSSNFGHDKTVIFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGRRDGSDFSHGRTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCADPGLPSNGRRDGSDFGHGRTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCADPGLPSNGRRDGSDFGHGRTVTFQCNDKYSLVGDESMSCNDGVWSAELPQCKAPCTDPGLPSNGKREGSDFGHDKTVTFQCNDNYTLVGNERMSCNDGVWSAELPQCKAPCADPGLPSNGKRDGSDFGHDKTVTFQCNDKYSLVGNERMRCNDGVWSANLPQCKANCHRNNSDVDRNCIKTCLSDDDCPANWKCLCDGDCGLSCVKNNLKCKRHPRGPKLKFLNNGRLFGSMVTYLCQEPYILHGSPKRTCRANGKWDGKRARCSLGDAKCAKILLGLLQNPPDNTTVTINAHLSMARYHCHKGFMLEGNNTRFCRNGRWLESTVPSCKASSLRYTACGESPVDFRARIIGGNESQRGWWPWHVGLYIRSGGKLNLQCGGALISSQWVLTTAECVTSHLLPDETINPLNYEIRAGDHRLDTMENTQQTISAEKIVYHQAFDPDTYMNDIALIKLQKPAELNKFVRAVCLPSQDGGDLAIPGKYGYATGWGYTKAREVSYSNTLQYSSFTIQSNSVCRYSTSYPYFSRVMFCAGDGGGKKGSCYGDAGGAFVREEKRGDGYRWVVTGIDSWGEACVQRNKYGYYTRVYSYINWINKTVREN

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q80T79	CUB and sushi domain-containing protein 3 OS=Mus musculus OX=10090 GN=Csmd3 PE=1 SV=3
Q96PZ7	CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
Q923L3	CUB and sushi domain-containing protein 1 OS=Mus musculus OX=10090 GN=Csmd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000334 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089 all species →	Trypsin	Trypsin	Domain	Interproscan
PF00084 all species →	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000436 all species →	Domain	Sushi/SCR/CCP domain	Interproscan
IPR035976 all species →	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001254 all species →	Domain	Serine proteases, trypsin domain	Interproscan
IPR050350 all species →	Family	Complement & Cell Adhesion Regulators	Interproscan
IPR008197 all species →	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR002557 all species →	Domain	Chitin binding domain	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR001314 all species →	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19325 all species →	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0030414 all species →	Molecular Function	peptidase inhibitor activity	Interproscan
GO:0008061 all species →	Molecular Function	chitin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044179768.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.