Detailed information of XP_044180240.1 in Acropora millepora

Genomic Location: NC_058073.1:265751...276660
NR annotation: XP_044180238.1, ectonucleoside triphosphate diphosphohydrolase 1-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49961Ectonucleoside triphosphate diphosphohydrolase 1 OS=Homo sapiens OX=9606 GN=ENTPD1 PE=1 SV=1
P97687Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1
Q21815Nucleoside-diphosphatase mig-23 OS=Caenorhabditis elegans OX=6239 GN=mig-23 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001770 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01150
all species →
GDA1_CD39GDA1/CD39 (nucleoside phosphatase) familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000407
all species →
FamilyNucleoside phosphatase GDA1/CD39Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11782
all species →
ADENOSINE/GUANOSINE DIPHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan
GO:0004382
all species →
Molecular FunctionGDP phosphatase activityInterproscan
GO:0005794
all species →
Cellular ComponentGolgi apparatusInterproscan
GO:0006256
all species →
Biological ProcessUDP catabolic processInterproscan
GO:0045134
all species →
Molecular FunctionUDP phosphatase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01510ENTPD1_3_8, CD39; apyraseEC:3.6.1.5
CD moleculesko04090deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_044180240.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

54Samples
0TPM > 0
2Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole larvae 30 0 0.00 0.00
branch 24 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (AMILL_TPM, StringTie quantification over 54 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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