Genomic Location: NC_058073.1:16711428...16727245
NR annotation: XP_044180331.1, centrosomal protein of 164 kDa-like isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044180331.1 |
| Protein |
| XP_044180331.1 |
| UniProt accession | Description |
|---|---|
| Q9UPV0 | Centrosomal protein of 164 kDa OS=Homo sapiens OX=9606 GN=CEP164 PE=1 SV=3 |
| Q5DU05 | Centrosomal protein of 164 kDa OS=Mus musculus OX=10090 GN=Cep164 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003137 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00397 all species → | WW | WW domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001202 all species → | Domain | WW domain | Interproscan |
| IPR053233 all species → | Family | Plasmodium ABRA-related | Interproscan |
| IPR036020 all species → | Homologous_superfamily | WW domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21715 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K16462 | CEP164; centrosomal protein CEP164 | - | Cilium and associated proteins | ko03037 | deepkoala |
Transcript abundance of XP_044180331.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
