Detailed information of XP_044180827.1 in Acropora millepora

Genomic Location: NC_058074.1:3360585...3371478
NR annotation: XP_044180827.1, protein amnionless-like isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BXJ7Protein amnionless OS=Homo sapiens OX=9606 GN=AMN PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005710 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14828
all species →
AmnionlessAmnionlessFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026112
all species →
FamilyAmnionlessInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14995
all species →
AMNIONLESSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006898
all species →
Biological Processreceptor-mediated endocytosisInterproscan
GO:0008104
all species →
Biological Processprotein localizationInterproscan
GO:0016324
all species →
Cellular Componentapical plasma membraneInterproscan
GO:0030139
all species →
Cellular Componentendocytic vesicleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18259AMN; protein amnionless-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_044180827.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

54Samples
0TPM > 0
2Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole larvae 30 0 0.00 0.00
branch 24 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (AMILL_TPM, StringTie quantification over 54 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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