Detailed information of XP_044180875.1 in Acropora millepora

Genomic Location: NC_058074.1:1367664...1371906
NR annotation: XP_044180875.1, tRNA wybutosine-synthesizing protein 5-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08BV2tRNA wybutosine-synthesizing protein 5 OS=Danio rerio OX=7955 GN=tyw5 PE=2 SV=1
A2RUC4tRNA wybutosine-synthesizing protein 5 OS=Homo sapiens OX=9606 GN=TYW5 PE=1 SV=1
A2RSX7tRNA wybutosine-synthesizing protein 5 OS=Mus musculus OX=10090 GN=Tyw5 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005072 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13621
all species →		Cupin_8Cupin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003347
all species →		DomainJmjC domainInterproscan
IPR041667
all species →		DomainCupin-like domain 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12461
all species →		HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0016706
all species →		Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0031591
all species →		Biological Processwybutosine biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18066TYW5; tRNA wybutosine-synthesizing protein 5EC:1.14.11.42
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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