Genomic Location: NC_058074.1:1597271...1605096
NR annotation: XP_044181594.1, LETM1 domain-containing protein 1-like isoform X1 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044181595.1 |
| Protein |
| XP_044181595.1 |
| UniProt accession | Description |
|---|---|
| Q924L1 | LETM1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Letmd1 PE=1 SV=1 |
| Q6P1Q0 | LETM1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LETMD1 PE=1 SV=1 |
| A3KN46 | LETM1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=LETMD1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008062 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07766 all species → | LETM1_RBD | LETM1-like, RBD | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR033122 all species → | Domain | LETM1-like, ribosome-binding domain | Interproscan |
| IPR044202 all species → | Family | LETM1/MDM38-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14009 all species → | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0043022 all species → | Molecular Function | ribosome binding | Interproscan |
| GO:0005743 all species → | Cellular Component | mitochondrial inner membrane | Interproscan |
XP_044181595.1.Transcript abundance of XP_044181595.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
