Gene detail

Detailed information of XP_044181675.1 in Acropora millepora

Genomic Location: NC_058074.1:3695032...3730827
NR annotation: XP_044181675.1, uncharacterized protein LOC122947247 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044181675.1

ATGAAACATTCAGACCACGGAAGAGAATCAGTGGTGTTACTCAAAATGAGAGGTTCGGGGTTTTCTAGCTCATGTCTATGGTTGGCAATATCCGTTTTTATAACTTCATTCTTTATAATTGTGGATTCAAATATAAACAGAGGTCCTACTAAAGCATCTGCGCGATTTCAGGCTTTCGAAGATTATGTGTTGGAGAACAACGTTATCGCTTCGTACCAAGTGACTTCTCAGGTGGAGTGCGGTTCCAAGTGTTTGCGTGATACAAGATGCTTGTCATTCAACTATAAAATAACCAACAGTAACATGGACGAGTGCGAGATAAATAAGGCCAACAAATCCACGTGCCCTGGTTGCTACCGTGCTCAAAAAAATTCCACCTATTATGATGATGAGATAAACAGATGCATTGGAAGTGATGATGAATGGTCAAATTACGATTTGTACTTTCCAAGCAAAGATGTTGACTCCTATGTCAACCAGACGTTTTCTGCAGACCTGGAAATGTTTACAATTTGCTTTTGGATGGAAACAAGTGACTCTCAACCGGGGACTACGTTCAGTTACGCAACCGAGCTATTTGACAACGCATTGACATTATTTAGGAACGAGTTGGCCATCAATGGAGCGTACAGCAACTATGATTTAGGAAAGTATTACAATGGACAAAAACATCATGTCTGTGTGAAGTGGGAAAATAAGACTGGATCGTGGAATCTCACCGTTGACGGAAAATTGATCAACCACGGAAGCGGATTTCAAGTTGGACGTGTTATTCGAGGGGGAGGGATAGTGATCGTCGGCCAAGATCAAGACTCCTACGGGGGCAAATTTGACTCGCCTCAGAGTTTTACAGGAAAAATCAGTGGGATAAATTTGTGGAGCAGAGTAGTAAGCCACAACGAGATACTGCGCATGTCTAAGATTGATTACACAGAAAACGGGGATGTTCTCAAATGGCCCGATTTTGTTGTCTCCAGATATAATGTGGAAATGCAATGCCCCTCTCAGCTTATTTGGAACTATTGGTTGTCAAACCAACCTCCAAGATTCCTCACTTCAGAAGAGGGGAGAATTGCTACAACGGAAGAGAATCAGTGGTATCAAACAGCTCTCAATTGTAAACTGAAGCCAATTTTTATGGAGGGGAAATTTTCGTCGACTATTCAAGTGTTACTCAAAATGAGAGGTTCGGGGTTTTCTAGCTCATGTCTATGGTTGGCAATATCCGTTTTTATAACTTCATTCTTTATAATTGTGGATTCAAATATAAACAGAGGTCCTACTAAAGCATCTGCGCGATTTCAGGCTTTCGAAGATTATGCGCTGGAGAACAACGTTATCGCTTCGTACCAAGTGACTTCTCAGGTGGAGTGCGGTTCAAAGTGTTTGCGTGATACAAGATGCTTGTCATTCAACTATAAAATAACCAACAGTAACATGGACGAGTGCGAGATAAATAAGGCCAACAAATCCACGTGCCCTGGTTGCTACCATGCTCAAAAAAATTCCATCTATTATGATGATGAGATGAACAGATGCATTGGAAGTGATGATGAATGGTCAAATTACGATTTGTATTTTCCAATCAAAGCTGTTAACTCTTATGTCAAGCAGACGTTGTCTTCAGACCTGGACATGTTTACAATTTGCTTTTGGATGGAAACAAGTGACTCTCAAGAGGGGACTACGTTCAGTTACGCAACCGAGTCAGGCGCTATCAATGAATTGACATTATTTAGGGACGAGTTCGCCATAAATGGATCGGAAAGGAATTATGATTTGAAAAATTATTACGATGGACAAACACACCATGTCTGTGTGAAGTGGGAAAATAAGGCTGGATCGTGGAGTCTCACCGTTGACGGAAAATTGATCAACCATGGAATCGGATTTCAAGTTGGACATGTTATTCGCGGGGGAGGGATAGTGATCGTCGGCCAAGATCAAGACTCCTACGGGGGCGCGTTTCAATGGTATCAGAGTTTTAAAGGAAAAATCAGTGGGATAAATTTGTGGAGCAGAGTAGTAAGCCACAACGAGATACTGCGCATGTCTAAGATTTGTTACACAGAAAACGGGGATGTTCTCAAATGGTCCGATTTTGTTGTCTCCAGATATAATGTGGAAATGCAATGCCCCTCTCAGCTTATTTGGAACTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P06205	C-reactive protein 1.1 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P06207	C-reactive protein 3.3 OS=Limulus polyphemus OX=6850 PE=1 SV=1
O70340	Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000095 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00354 all species →	Pentaxin	Pentaxin family	Domain	Interproscan
PF00024 all species →	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051360 all species →	Family	Neuronal Pentraxin and Related	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19277 all species →	PENTRAXIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_044181675.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044181675.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.