Genomic Location: NC_058074.1:7301270...7316052
NR annotation: XP_044181745.1, LOW QUALITY PROTEIN: uncharacterized protein LOC122962624 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044181745.1 |
| Protein |
| XP_044181745.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000389 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00931 all species → | NB-ARC | NB-ARC domain | Domain | Interproscan |
| PF13424 all species → | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00791 all species → | ZU5 | ZU5 domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 all species → | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR051787 all species → | Family | Effector and Ciliary Development-Associated Protein | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR002182 all species → | Domain | NB-ARC | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| IPR000906 all species → | Domain | ZU5 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45641 all species → | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0043531 all species → | Molecular Function | ADP binding | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
XP_044181745.1.Transcript abundance of XP_044181745.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
