Genomic Location: NC_058074.1:2167955...2181757
NR annotation: XP_029206586.2, protein Wnt-8b-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044181772.1 |
| Protein |
| XP_044181772.1 |
| UniProt accession | Description |
|---|---|
| P51029 | Protein Wnt-8b OS=Danio rerio OX=7955 GN=wnt8b PE=2 SV=1 |
| P51028 | Protein Wnt-8a OS=Danio rerio OX=7955 GN=wnt8a PE=2 SV=2 |
| Q93098 | Protein Wnt-8b OS=Homo sapiens OX=9606 GN=WNT8B PE=2 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000885 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00110 all species → | wnt | wnt family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005817 all species → | Family | Wnt | Interproscan |
| IPR043158 all species → | Homologous_superfamily | Wnt, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12027 all species → | WNT RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005102 all species → | Molecular Function | signaling receptor binding | Interproscan |
| GO:0005576 all species → | Cellular Component | extracellular region | Interproscan |
| GO:0007275 all species → | Biological Process | multicellular organism development | Interproscan |
| GO:0016055 all species → | Biological Process | Wnt signaling pathway | Interproscan |
| GO:0005109 all species → | Molecular Function | frizzled binding | Interproscan |
| GO:0005125 all species → | Molecular Function | cytokine activity | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0030182 all species → | Biological Process | neuron differentiation | Interproscan |
| GO:0045165 all species → | Biological Process | cell fate commitment | Interproscan |
| GO:0060070 all species → | Biological Process | canonical Wnt signaling pathway | Interproscan |
XP_044181772.1.Transcript abundance of XP_044181772.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
