Genomic Location: NC_058075.1:19404229...19417401
NR annotation: XP_044182002.1, membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044182002.1 |
| Protein |
| XP_044182002.1 |
| UniProt accession | Description |
|---|---|
| Q4L1J4 | Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Magi1 PE=1 SV=1 |
| Q6RHR9 | Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Mus musculus OX=10090 GN=Magi1 PE=1 SV=1 |
| Q96QZ7 | Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 OS=Homo sapiens OX=9606 GN=MAGI1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003778 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00397 all species → | WW | WW domain | Domain | Interproscan |
| PF00625 all species → | Guanylate_kin | Guanylate kinase | Domain | Interproscan |
| PF00595 all species → | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 all species → | Domain | PDZ domain | Interproscan |
| IPR036034 all species → | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR001202 all species → | Domain | WW domain | Interproscan |
| IPR036020 all species → | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR008145 all species → | Domain | Guanylate kinase/L-type calcium channel beta subunit | Interproscan |
| IPR020590 all species → | Conserved_site | Guanylate kinase, conserved site | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR008144 all species → | Domain | Guanylate kinase-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10316 all species → | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0007165 all species → | Biological Process | signal transduction | Interproscan |
XP_044182002.1.Transcript abundance of XP_044182002.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
