Detailed information of XP_044182237.1 in Acropora millepora

Genomic Location: NC_058075.1:2188064...2203877
NR annotation: XP_044182237.1, uncharacterized protein LOC114966062 isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0DXS3Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2
Q9LQV2RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1
Q8LHH9Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000941 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04851
all species →
ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF01909
all species →
NTP_transf_2Nucleotidyltransferase domainDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF05183
all species →
RdRPRNA dependent RNA polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR006935
all species →
DomainHelicase/UvrB, N-terminalInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR038557
all species →
Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR043519
all species →
Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR002934
all species →
DomainPolymerase, nucleotidyl transferase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007855
all species →
FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23079
all species →
RNA-DEPENDENT RNA POLYMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan
GO:0016779
all species →
Molecular Functionnucleotidyltransferase activityInterproscan
GO:0003968
all species →
Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0030422
all species →
Biological ProcesssiRNA processingInterproscan
GO:0031380
all species →
Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_044182237.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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