Genomic Location: NC_058075.1:3279372...3282142
NR annotation: XP_044182580.1, ragulator complex protein LAMTOR5 homolog [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044182580.1 |
| Protein |
| XP_044182580.1 |
| UniProt accession | Description |
|---|---|
| A7RT29 | Ragulator complex protein LAMTOR5 homolog OS=Nematostella vectensis OX=45351 GN=v1g226489 PE=3 SV=1 |
| Q4PM15 | Ragulator complex protein LAMTOR5 homolog OS=Ixodes scapularis OX=6945 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0009423 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16672 all species → | LAMTOR5 | Ragulator complex protein LAMTOR5 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR024135 all species → | Family | Ragulator complex protein LAMTOR5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13342 all species → | RAGULATOR COMPLEX PROTEIN LAMTOR5 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0043066 all species → | Biological Process | negative regulation of apoptotic process | Interproscan |
| GO:0043154 all species → | Biological Process | obsolete negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | Interproscan |
| GO:0071986 all species → | Cellular Component | Ragulator complex | Interproscan |
| GO:0005085 all species → | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
| GO:0005764 all species → | Cellular Component | lysosome | Interproscan |
| GO:0071230 all species → | Biological Process | cellular response to amino acid stimulus | Interproscan |
| GO:1904263 all species → | Biological Process | positive regulation of TORC1 signaling | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K16344 | LAMTOR5, HBXIP; ragulator complex protein LAMTOR5 | - | mTOR signaling pathway | ko04150 | deepkoala |
Transcript abundance of XP_044182580.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
