Genomic Location: NC_058075.1:16012024...16023695
NR annotation: XP_044182620.1, LOW QUALITY PROTEIN: cytosolic carboxypeptidase-like protein 5 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044182620.1 |
| Protein |
| XP_044182620.1 |
| UniProt accession | Description |
|---|---|
| Q8NDL9 | Cytosolic carboxypeptidase-like protein 5 OS=Homo sapiens OX=9606 GN=AGBL5 PE=1 SV=1 |
| B0JZV4 | Cytosolic carboxypeptidase-like protein 5 OS=Xenopus tropicalis OX=8364 GN=agbl5 PE=2 SV=1 |
| Q09M02 | Cytosolic carboxypeptidase-like protein 5 OS=Mus musculus OX=10090 GN=Agbl5 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006113 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18027 all species → | Pepdidase_M14_N | Cytosolic carboxypeptidase N-terminal domain | Domain | Interproscan |
| PF00246 all species → | Peptidase_M14 | Zinc carboxypeptidase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040626 all species → | Domain | Cytosolic carboxypeptidase, N-terminal | Interproscan |
| IPR034286 all species → | Domain | Cytosolic carboxypeptidase-like protein 5 catalytic domain | Interproscan |
| IPR000834 all species → | Domain | Peptidase M14, carboxypeptidase A | Interproscan |
| IPR050821 all species → | Family | Cytosolic carboxypeptidase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12756 all species → | CYTOSOLIC CARBOXYPEPTIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004181 all species → | Molecular Function | metallocarboxypeptidase activity | Interproscan |
| GO:0035608 all species → | Biological Process | protein deglutamylation | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K23438 | AGBL5, CCP5; cytosolic carboxypeptidase protein 5 | EC:3.4.17.24 | Peptidases and inhibitors | ko01002 | deepkoala |
Transcript abundance of XP_044182620.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
