Genomic Location: NC_058075.1:18890284...18894621
NR annotation: XP_044183116.1, LOW QUALITY PROTEIN: endonuclease domain-containing 1 protein-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044183116.1 |
| Protein |
| XP_044183116.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000569 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01223 all species → | Endonuclease_NS | DNA/RNA non-specific endonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001604 all species → | Domain | DNA/RNA non-specific endonuclease | Interproscan |
| IPR039015 all species → | Family | Endonuclease domain-containing 1 protein | Interproscan |
| IPR020821 all species → | Domain | Extracellular Endonuclease, subunit A | Interproscan |
| IPR044925 all species → | Homologous_superfamily | His-Me finger superfamily | Interproscan |
| IPR044929 all species → | Homologous_superfamily | DNA/RNA non-specific endonuclease superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21472 all species → | ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
XP_044183116.1.Transcript abundance of XP_044183116.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
