Genomic Location: NC_058077.1:5025023...5029983
NR annotation: XP_029210463.2, NACHT, LRR and PYD domains-containing protein 14-like [Acropora millepora]
Species Acropora millepora · all data for this species · gene families
| CDS |
| XP_044184530.1 |
| Protein |
| XP_044184530.1 |
| UniProt accession | Description |
|---|---|
| A0A386CAB9 | NACHT, LRR and PYD domains-containing protein 1 homolog OS=Danio rerio OX=7955 GN=nlrp1 PE=1 SV=1 |
| P59045 | NACHT, LRR and PYD domains-containing protein 11 OS=Homo sapiens OX=9606 GN=NLRP11 PE=1 SV=2 |
| P33076 | MHC class II transactivator OS=Homo sapiens OX=9606 GN=CIITA PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0011570 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13516 all species → | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| PF17779 all species → | NOD2_WH | NOD2 winged helix domain | Domain | Interproscan |
| PF05729 all species → | NACHT | NACHT domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032675 all species → | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR001611 all species → | Repeat | Leucine-rich repeat | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR041075 all species → | Domain | NOD2, winged helix domain | Interproscan |
| IPR038359 all species → | Homologous_superfamily | Connexin, N-terminal domain superfamily | Interproscan |
| IPR050637 all species → | Family | NLRP family, innate immunity and inflammation regulators | Interproscan |
| IPR007111 all species → | Domain | NACHT nucleoside triphosphatase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45690 all species → | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
XP_044184530.1.Transcript abundance of XP_044184530.1 across 54 RNA-seq samples of Acropora millepora. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole larvae | 30 | 0 | 0.00 | 0.00 | |
| branch | 24 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AMILL_TPM,
StringTie quantification over 54 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
