Gene detail

Detailed information of XP_044185128.1 in Acropora millepora

Genomic Location: NC_058078.1:21800789...21811534
NR annotation: XP_044185127.1, uncharacterized protein LOC122965241 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044185128.1

ATGGATCAGGAAGAGAGGCTTGCTCATAATCAGGCTGCTGGCAATGAGAAATCAGATCCAATTATTATTTCATCAAGCTCTGAAAGTGAAAATGAGCAGATAAAAGGAGCAGAAGCAATGCATATGAGTGAGCTAGAGGAAGATGATAATGACAGCGACTGTATTGATGATAATGAACAGTCATGTGATGATGAACTTAATTCTGATGCTGTGTCAGAAATTCTGAAGCTGTTGGACACTTATAAAGTAAATTTTAAGAATGGAGGGGGTAGCAGTGCTACTAGAAGGTGCCAAATGATGGAACATTCACAGTATAAAAGGCGGGATCAATGGTGGAAAAAGAAAACTGAGACGAAAGTTCCCCAGTGGCGGCGAATTAAGAATTTGGAATCAGAAAGCGAGGATAGTGAAGATGGTAATGATAACAAAGAGATAGGCCACAGATATCCTCCTCCTCATGTTGCCATCATAGAAAATGATTTTGGCTTAGTAAAAGAACTGACAGGACATTCACAGTATAAAAGGCAGCATCAATGGCGGAGAAAGAAAAGTGAGACGAAAGATTCCCAGTGGCAGCGAATTAAGAATTTGGAGTCAGAAAGCGAGGATAGTGAAGATGGTGATGAGGACTCAGAGATGGGCCAGAGACATCCCCCTCTTCATGTTGCCATCATAGAAAATGATTTTCGGACAGTAAAAGAACTGATTAAAGAGGATTCTGACTGTATTTATGAGCTGGGTTATCGAAAGAGAACTGCATTGCATCTAGCGGCATTGGAAGGTAGAGTTGATCTTGTAAAACTGCTGCTTAATCATAATGCTGATTGCAGTGCATTGGATTGCTACCATCTTCCAGCCATTGCATATGCTGCAGATGGTCATCCGGACTGTTTAAGACTGATGCTTGATCATGCAAACATAAAGAGCATTTGCAAGAGAATGAGACGCAATCCCCAAGGAATGAATTTGTTGCATTTTGCAATTGGTGAGAATAGGGAAGTGTTGGAATGTGACAACAGGGCAAAATGCTTGGAACTGCTGTTTAGTCAAGATAAGGTAACATGCTCTAAGCTATTGGAAGAGAGAGATGCCAGGGGATTTTCTCCATTGGTTGCAGCCATCTATGCTGGACAGCACAAGTGTGTTGCAGTATTACTGAAGATGGGTGCAAATACTTTTGAATTTAAGACTGATGACGGTGGAAACATGTTGCATTTTGCTGTAAAATATGCCTCGCACTTCAAAGATTCACAGGAATGTGTAAATGACACCTCACTTTCCCTAAGAGAAGTCCTAAAGGCCTTAAATCTTGTTATTGATGATGTTGATAATTATGGTTTCACTCCTTTGATGTACGCTTGCAAGAGTGGCAATCCTCAATGTGTCAAAACACTTCTGGAGAATGGAGCATCGGTCAATTTTTCTGACAGCCATGGTACATCAAGCCTTTGTCTTGCAGCAATGTCAGGAGATACAGAATGTGTTCAGTTACTGCTCAGCTTGAAACCAAAACCAGAGCAGGAGTTTTTCTTGAGAGACTTGCTGAGGAAAGGAAGGAATAAGCTGGAGAAGAAGAGGACAGTAAAGGTTAGCAAAGAAAACTGTCTGTCTACAGGGAATACAGTAAGACAAAAAGACAAAAAGGCAATAAAACGTAGGGGAAAGGAGGAGAGGAAGGACCTCAAGAGAAGAAGAATTCAGTTAGATAACGAAAGAGGCAGCACCCAATACCAGCAAACAGTCCAAGAGGGTACAACATGTGAAAAAGATGTTGGACTATGGCACTGTTCTGATATGGAAGGGATACCTCCACCAATTCAGCCACCTCAGGGTGAATGTTTGTCTTCAGTGGATTCAGCCATAAACATTGTGTTTGATGTGGAAACTACTAGCTTTGCCACAGATGCTGACATAATCCAGCTTTCGGCTGTCCATGGCAATGATGAATTTAACATCTATATCATCCCTGAGCAGAAAATCAGTATTTCAGCCTCCTTAGTAACACAGCTTGACATGGTGGGAGGTAGACTGTTGCACAGGGGAGAGCCTGTGCCTGCAGAGCAACCAAGAGAAGCTTTTGAAAAGTTCTTGGCATGGCTTAAGGGTAAAAAAGAGAAAGTGGTACTCCTTGCCCACAATGCTAAATGTTTTGACAGCAAGCGAATAATTTATGCCTTAAAAAAGTATGATCTGCTGAGTTCCTTCCAAGAGTGTGTTCTAGGTTTCATTGATACCCTGGCTTTATTTAAGAAAGTCCTTCCTGGTAGAGAGACATATTCTCAGGAATGTCTAGTTGCTGATCTTTTAGGCATGTTCTATGTCTCTCATGATTCTCTTGAAGACGTGAAGGCTCTCCAGAGGCTGGTATCCTGTAAAAAAGTTGAGGAAAACCAACTAATTGAGTCCAGCTTTTCAACAGAGTCTGCTGTGCAAAGTACTGAATATTGTGTAAAGAAGATGGTCAATTTACGCACCCTTCAACCTCTTATTGCAAGTAAAGTTGTTAGCAAAGGAATGGCTGAAAAAATTGCTGGTTCTGGGTTATCTTTGCACCACCTTCAACTTTCTTTTGAGAGGGGAGGGGAAGATGGGCTCATCAGCATTTTATCAGACCATGTAAATGGAAAACCAAGGGTAACAAAAAACAGAAGAATTATTTCACAGCTAAGCAACTACTTTGGCTGCAATAACGAAACAAACAGCGACCTGTTTCTCGAAAGTCCCGAAACTTTTCGGGAGCTATTCAGGTGA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000127 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00929 all species →	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR013520 all species →	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178 all species →	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0030315 all species →	Cellular Component	T-tubule	Interproscan
GO:0036371 all species →	Biological Process	protein localization to T-tubule	Interproscan
GO:0055117 all species →	Biological Process	regulation of cardiac muscle contraction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044185128.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.