Gene detail

Detailed information of XP_044185230.1 in Acropora millepora

Genomic Location: NC_058078.1:17757951...17771710
NR annotation: XP_044185230.1, uncharacterized protein LOC114959565 isoform X2 [Acropora millepora]
Species Acropora millepora · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

XP_044185230.1

ATGTTATCTGCCAGACTACGAAGTTATGCAGTTCATGAGATGTTAACAAGAATAACTGTTTGTGTACTTTTATGTTTTTTGGCGTGTACAGTAAAAGAATTGTCAGCTTCGTCAACGCGCCTTGCAGCTTCGGTAACCGTCGATCCATTCTCCACTGTTTTTCCCACCGCTTCATCTCCTACGTCGACTGCATCCCTCCCTTCCCCCACCTGGGGCATCATCCTTTCCACTAAAAACACGTCTTTACAACTGTCGATTCAACTCACTCAAAACCGCTGGTCTATATTTCCTACGCCGACTGCATCTCTCCCTTCCCCGTCCTGGAGCGTCATCCTTCCCGCTAAAAACACGTCTTTTCAACTGTCAATTCAACTCACTAAAACGCCCTGGTCAGACGAGCTATTTAACGAGCAGACCCCGAGCTTCATTAGTTTGTCGTCAAACCTTACTTCAACGATTTCTAGTGTTTTGAAAGATCACGTCGGAGAAGCTAAGGTCGAAGTTCTAGAATTCAAACCTGGAAGCGTGATTGCAGTTTTTAAAGTAACAGCTCTCTCGTCACTAGAAAGTGAGATAAAGAACCGCATCGTTGCTGAAATGAGGGATAGAAAGCTTGGCAGCTTTGCCGTCGAGCCGGTGCCTTATTCAGGTGCCATCTTCGACGTCACTATAAAAATAAATACCGCTTGCAACGACTCCGCTGTTAATAAGGGTTTTGTCAAAAAAGAAAAGCTAGAAAACGCCATCATCACGAACCTCGTCTCCAGCAACAAGGAATTCACCGCTGCAAACATTCGCTTCATCAACTGTCCGCAAGATGCCAATGAGAATATTACCATAGTAACAGCTCGCGTTCAGTTGAATGATCTGTCAGCGGTGAACCCAAGCAAGGTGATGCGCAGTTTGAAGAGTTCTGTGGAATCGGGTCGAGTTGGAAATTTCTCGGTGGTTCCTGAATGGAAATCGTTTGTCCCCGGGGAGAAGTTATTTCATTTCAGGGCTACCGTGAGACATGACAGCGCTCATGCTCTTCAGAACAAGACAGGCTTAGAGGAGTTAATACAAGAAAGGTTTAAGGCTAAAAGCAACTTCAGATACGTTAACCTTGAGATACCAAATAACACCACTTTGGCATTTGACATTGGGATGGATTCATCGACTTCTGAGTTGCCTTTCATCGCGCTAGATGCATTGGCCAGCGATCTTCGTTGGTCGACATTAGGGAAAGTCAAGTTCTTCAGAAATACAATTCGAGTTACCGTCGACCCTAAATCGTTAACAAAGAAAACGTTTGAGGTCAACTTTGCTCAGAATGTACCAAATTGCAACGCAACAGAAATCGCTAATACCAGTAGTTTTCATTACAAAAATCTGAGTGTCGGTGCCGAGGAGTTCATTGACAGCACACTGAGAGCCACTCATCGCAAGGTCAAAGAGTTTTATTTGGAAACTGAAGTGCAAGCGTTGCGGTGCCACAATGTCACTACAGTTCGAAGCGTTAGCTACGTGTACCTAAAGCCGAACGCAGAGGATAAAATTGGCTTGCTTTATCCTCTGCTAAGGTGCAAGGTGGAACCTGCTATCTATGATTGGGGTGTTAAAATACAGCTCAAGACTCCGACAACATTGGATATTAGAGGTTCTTGGAATGTTCTTCAAGGAATTTGGATTCATTGGGTGTGCCCGAGACCTCCCAAACCAAAGCCCCCAACTCAAAGACCCACGGTTCCTACCACGACCACAGGGAAACCAACAAATAGGTCAAAAATCTCCACTACTGACTCTCTGCTAAATGAAACAAAATCACCTGCAACGTCAAAGAGGCCAACGACGAAAGAAACTCTGTCCACGTCGAGTTCCAAAACTGAACTGTTCATCAAAGTGGATCTAGGAATGACTTGGAGAGAGTTTTGTTCCAAGCAAGGAGTCTTCAGGGAGAGGATAGCAGGGATCTTGGAAGACAACAATGGAACTAAGCTATCCCCTGACAGGATCGTTTATGTCAATGTGGCGGAGAACTGCGCGGATCCGAACAAACAGAATGAGTTGGCAGAAGTTTGGTTTTATGTGTCTAAAGCTGGCTCCAAAGATCTGGACATATCTCTCACTTTGAAAGCTTATGAACTGTTTGTAATGTTTTTTGAAAACGCAAACACGAAACCGCTTGGACCGGACTTTGAAGAAAAGGTTATCAAAGTTGTGTTGGCTGGGACCGGAGCCGCCAAATATAAAAAGGATACCGATTGTGGACTTTCTTCCCGTTCTATCATTCTGATTGCTGTGGCCGCAGCTGTGGGTCTGTTTCTCATGTTATTGGCTTGCTGCTGTCTGTTCTGTTGCAGTAAAAGACGAGCAAGTCAAAGTCAATATAAATATGATTCCAAACAGCACCATGCCATGCATATCATCCATGTCGATGCCGGAGTAGCTAAAGTGAACGAAGACCGCGAGAAAAACACAAACAAGAACAAAGATGTTGAGTTGCAGGAGAAGGATGGGGCAGGAGATTATAAGCGAAACTGTAGGGATGGTTGTCACAAGAACGATGGAGTGGACGGTGTGCAGGACGAACGCAACAACAACAAAAGTAATGACGAAACAGGAAATAACTTTAAAGAAGTCGCCAAGGAGAGCCATGTCAATATCTTCCAGAATGTCAGTGGAAAGGAGAAAGTTACGGAGAAAGAGATTGCTTCTTCTAACGTACAATTGGAAGGCAATGGTCCAGCCGATGCGCTTCGAGATATCCAGAGCCACAGCTATGAAGAGTTAGGCACCAGTAATGCTGGCTCTCACACCCACGATGCTATGAGGAAATCGAGCGAAAGCGTAGACAAAAACAGCAGCACAATCAATGTGTCAAGTGTGCCTGCTGTGTTTTCTCCTGTCTCCTGTGTGGTGAACGTAGATAGTGTTGATGATGAGGGAAGGAACAATAAAGGCATAATTCACAACAGTAGCACTTCTGCGGCAATCAAAGGACCAGAGACTATGGAGATAGGGTCCCAGTACTCCTCGGTTTACATCAAGAAATTAGACGCTGATCCAAAGAATCAAGAAAGGAGAGGCTCAAATGTGCAACCGCTGACTGATGAAGATGTGCCGCTGACGCACAAAACAGGAACCGTGGGAATCGTTGCGTTGGCAATACGGAACAAAAATGAGAATAAAAAAGAGACGGAATTTAAGAATCTCAGCAGAGACATGCCCTTTGAAGATGTGAAGTACCCTTCAGATACAGCCATCAAGAACAGATATCCGGATGTGTTGCCAGCTTCTACAAGTCGTGTTAAGCTATCAACTCAGCCAGACTATATCAATGCCAATTGGATCAGGGACCACAAAGGGAAAAGACGCTATATTGCTACCCAACATCCCTTGCAGGAGACCATGGGGGATTTCTGGCGAATGGTTTGGGACCAACGAGCTAATGTCGTGGTTATGGTAAATGATGAGGAAAAGGATAAACCGGCCGATTTTTCCGTGTACTTGCCGAAAGGAGAAGGTCACTCGATGCGGTATGGCTCCATTGATGTTACTGTCAATCAAATCACTGACAAGGGAGATTACGTTATGAGCGTTCTTAGCATTGCGGAAACCAAGACAGAATCTCCACGCGAAGTCACTCACATGAAGTTCTCCTCGTGGAAGGGACGATTGATGCCCAATGTGGCTCTGTTTGTTGGTTTTGTGATGGCCACAAAGGAAGCAAGAAAAAAGTATGGAGATACAAATGCTCCAGTCATTGTACACTGCAGCGATGGTTTGGGTTTCACTGGAGTGTACATTGCCCTGGATATCGGAATTATGAGCCACGAGGAAAGCAAGACATCAATAGTTGACGTGTTTGAATTGTCGAAAAGTCTCAGGCGTGACCGACACGGAATTGTTTCTTCTCTAGATCGTTACAACTTCATCTACCAGGCTCTTTACGAATATACCGTGAACTGTGACAAATCGAACTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P35234	Tyrosine-protein phosphatase non-receptor type 5 OS=Rattus norvegicus OX=10116 GN=Ptpn5 PE=2 SV=2
P16620	Tyrosine-protein phosphatase 69D OS=Drosophila melanogaster OX=7227 GN=Ptp69D PE=1 SV=2
P54830	Tyrosine-protein phosphatase non-receptor type 5 OS=Mus musculus OX=10090 GN=Ptpn5 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003255 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF00102 all species →	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR000242 all species →	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR050348 all species →	Family	Protein-Tyrosine Phosphatase	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19134 all species →	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_044185230.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.