Detailed information of XP_046840040.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813447.1:2279823...2286091
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00808
all species →		CBFD_NFYB_HMFHistone-like transcription factor (CBF/NF-Y) and archaeal histoneDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003956
all species →		Conserved_siteTranscription factor, NFYB/HAP3, conserved siteInterproscan
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR027113
all species →		FamilyTranscription factor NFYB/HAP3Interproscan
IPR003958
all species →		DomainTranscription factor CBF/NF-Y/archaeal histone domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11064
all species →		CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001228
all species →		Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016602
all species →		Cellular ComponentCCAAT-binding factor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08065NFYB, HAP3; nuclear transcription Y subunit beta-Transcription factorsko03000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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