Detailed information of XP_046840258.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813447.1:6868015...6873196
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00456
all species →		Transketolase_NTransketolase, thiamine diphosphate binding domainDomainInterproscan
PF02779
all species →		Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF02780
all species →		Transketolase_CTransketolase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051424
all species →		FamilyTransketolase-likeInterproscan
IPR005474
all species →		DomainTransketolase, N-terminalInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR005475
all species →		DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR020826
all species →		Binding_siteTransketolase binding siteInterproscan
IPR033248
all species →		DomainTransketolase, C-terminal domainInterproscan
IPR009014
all species →		Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43195
all species →		TRANSKETOLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004802
all species →		Molecular Functiontransketolase activityInterproscan
GO:0030976
all species →		Molecular Functionthiamine pyrophosphate bindingInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00615E2.2.1.1, tktA, tktB; transketolaseEC:2.2.1.1
Biosynthesis of ansamycinsko01051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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