Detailed information of XP_046849600.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813402.1:7381538...7386529
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan
PF05495
all species →		zf-CHYCHY zinc fingerDomainInterproscan
PF14599
all species →		zinc_ribbon_6Zinc-ribbonDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR037274
all species →		Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan
IPR017921
all species →		DomainZinc finger, CTCHY-typeInterproscan
IPR008913
all species →		DomainZinc finger, CHY-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR039512
all species →		DomainRCHY1, zinc-ribbonInterproscan
IPR037275
all species →		Homologous_superfamilyZinc finger, CTCHY-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21319
all species →		RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10144RCHY1, PIRH2; RING finger and CHY zinc finger domain-containing protein 1EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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