Detailed information of XP_046849708.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813483.1:12416842...12430708
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08169
all species →		RBB1NTRBB1NT (NUC162) domainDomainInterproscan
PF11717
all species →		Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan
PF01388
all species →		ARIDARID/BRIGHT DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001606
all species →		DomainARID DNA-binding domainInterproscan
IPR051232
all species →		FamilyAT-rich Interactive Domain/SWI1 Chromatin RemodelingInterproscan
IPR000953
all species →		DomainChromo/chromo shadow domainInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR012603
all species →		DomainARID4A/B, PWWP domainInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR036431
all species →		Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR025995
all species →		DomainRNA binding activity-knot of a chromodomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13964
all species →		RBP-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000976
all species →		Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_046849708.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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