Detailed information of XP_046851677.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813484.1:9307489...9314463
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929
all species →		RNase_TExonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR047201
all species →		DomainERI-1-like, DEDDh 3'-5' exonuclease domainInterproscan
IPR003034
all species →		DomainSAP domainInterproscan
IPR051274
all species →		Family3'-5' ExoribonucleaseInterproscan
IPR013520
all species →		DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23044
all species →		3'-5' EXONUCLEASE ERI1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000175
all species →		Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000467
all species →		Biological Processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18416THEX1, ERI1; 3'-5' exoribonuclease 1EC:3.1.-.-
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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