Detailed information of XP_046852083.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813485.1:15579174...15590362
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08158
all species →		SDA1_HEATSDA1, HEAT repeatRepeatInterproscan
PF05285
all species →		SDA1_domSDA1, conserved domainDomainInterproscan
PF21638
all species →		SDA1_CSDA1, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027312
all species →		FamilySda1Interproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR012977
all species →		DomainSDA1, N-terminalInterproscan
IPR007949
all species →		DomainSDA1, middle domainInterproscan
IPR048292
all species →		DomainSDA1, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12730
all species →		HSDA/SDA1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000055
all species →		Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0042273
all species →		Biological Processribosomal large subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14856SDA1, SDAD1; protein SDA1-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP