Detailed information of XP_046854635.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813486.1:18849974...18851856
NR annotation: no NCBI-NR hit recorded
Species abbreviation XSP · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04034
all species →		Ribo_biogen_CRibosome biogenesis protein, C-terminalDomainInterproscan
PF04068
all species →		RLIPossible Fer4-like domain in RNase L inhibitor, RLIFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022968
all species →		Family16S/18S rRNA aminocarboxypropyltransferase Tsr3Interproscan
IPR007177
all species →		Domain16S/18S rRNA aminocarboxypropyltransferase Tsr3, C-terminalInterproscan
IPR007209
all species →		DomainRNase L inhibitor RLI-like, possible metal-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20426
all species →		RIBOSOME BIOGENESIS PROTEIN TSR3 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0016740
all species →		Molecular Functiontransferase activityInterproscan
GO:0106388
all species →		Molecular Function18S rRNA aminocarboxypropyltransferase activityInterproscan
GO:0030490
all species →		Biological Processmaturation of SSU-rRNAInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09140TSR3; rRNA small subunit aminocarboxypropyltransferaseEC:2.5.1.157
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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