Detailed information of XP_046857652.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813436.1:4518894...4523224
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05181
all species →		XPA_CXPA protein C-terminusDomainInterproscan
PF01286
all species →		XPA_NXPA protein N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000465
all species →		FamilyXPA/RAD14Interproscan
IPR022656
all species →		DomainXPA, C-terminalInterproscan
IPR037129
all species →		Homologous_superfamilyXPA domain superfamilyInterproscan
IPR022652
all species →		Conserved_siteZinc finger, XPA-type, conserved siteInterproscan
IPR009061
all species →		Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10142
all species →		DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000110
all species →		Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000715
all species →		Biological Processnucleotide-excision repair, DNA damage recognitionInterproscan
GO:0003684
all species →		Molecular Functiondamaged DNA bindingInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0033683
all species →		Biological Processobsolete nucleotide-excision repair, DNA incisionInterproscan
GO:0070914
all species →		Biological ProcessUV-damage excision repairInterproscan
GO:1901255
all species →		Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10847XPA; DNA-repair protein complementing XP-A cells-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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