Detailed information of XP_046860032.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813488.1:7410719...7415428
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08156
all species →		NOP5NTNOP5NT (NUC127) domainDomainInterproscan
PF01798
all species →		NopsnoRNA binding domain, fibrillarinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012976
all species →		DomainNOSICInterproscan
IPR045056
all species →		FamilyNucleolar protein Nop56/Nop58Interproscan
IPR012974
all species →		DomainNucleolar protein 58/56, N-terminalInterproscan
IPR036070
all species →		Homologous_superfamilyNop domain superfamilyInterproscan
IPR042239
all species →		Homologous_superfamilyNop, C-terminal domainInterproscan
IPR002687
all species →		DomainNop domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10894
all species →		NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030515
all species →		Molecular FunctionsnoRNA bindingInterproscan
GO:0031428
all species →		Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14565NOP58; nucleolar protein 58-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP