Detailed information of XP_046860241.1 in Xenia sp. Carnegie-2017

Genomic Location: NW_025813488.1:4026368...4035742
NR annotation: no NCBI-NR hit recorded
Species Xenia sp. Carnegie-2017 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
Sequence data are not available for Xenia sp. Carnegie-2017.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02893
all species →		GRAMGRAM domainDomainInterproscan
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR004182
all species →		DomainGRAM domainInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR036017
all species →		DomainTCB1D9/TCB1D9B, PH-GRAM domain 2Interproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR036014
all species →		DomainTCB1D9/TCB1D9B, PH-GRAM domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47666
all species →		PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTICInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19951TBC1D8_9; TBC1 domain family member 8/9-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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