Gene detail

Detailed information of XP_058941607.2 in Pocillopora verrucosa

Genomic Location: chr4:4561342...4566190
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059085624.2

GGCTCTGCCATGGAGCCTGATCAATAGTTGATGGCATTCTCTTGACTTTTGTGCTTGTtgatgaatatattttttacttttttgcgATTTGTTCGTATCAAGAACCCGTGATCAAAGGTTAAAAGGAACTTGAAATATCTTTAACCTGAGATGGACATTACGAAAGAAGTGGAAAGCGCATTGGAAGAAGAAGGTTACGTTAAAATCGACTCGACTTCGTCGAGCACCATGTCCACCTCTACTTCTCCTGTTTCCATTGGGGATAAAAAATCGAGTTCACGTGGCGTCACTTCGGTTCATTCGCACTCGGTGACCCAAATAACGAGCCCCGTTCAGCAGAAGATTCGCACGGATGTTTCAGCAAGTGATCTCATGGAAAATAAGAGTGATAAATCATCTCCAAATTCATCATCGACGTGGCAAGGCCAGGGGCAAACTTCTGACCAGGATGGCGATGGGAATGATGACTTAACTAGCGGGGTTTGGGGCTGGATGTCCACTGCAATGTCGGTTGGATTACAAACAACACAAAACATTGGTAGAAATATTATGGAGAAAACCAAGACTTCAGTTGAAAGTGTGATCACAACACTTGACCCAGAAATGGAGGACTACTTATCAGACAGAAGAGAACAGTCTATAAGCCTGGCTGTTGCAACCACTGATACTGAAGCCATAGAAGCAATAAAGGATGGGTTCCGTCAAGTGTTTGAACATGTTACCGTGCAGTCAAATTCCTCGACATCTGGGATTGCTCCCCTTCCTGTAGGATTTTCAGCTGGGGTGAAGGGAGCACAGCATAGAATAGCCAGTTTAGTGCATGGAAAGAAAGTGCAGGAAGGTCAAGTGATCATTGGAGTGGAAGAAATGTTGTCAGAGCTGTTACCTGGCAAGTGGTTTGGTTTAACATGTCTTGCACTGAGTGACCCAACTTCAAAGACAGAGCTTGAAACATTCTCTCAATCAGTCCAAATTCCAAGTTTTTATATCAAGAAAGCAGAGGAAAGCACCCCATCTAATTACAACCTAAGGTGGTCAGGGCTATCATTTACTCTTGGGGAGGTCATGCTTGGCTCTGGGCAAGAGTATGGCGATTGGCATTCTAAAATATCAGgTTCTTCCAAAAGACAAATTCTTACTTTAGCTGCTAGGAGTTTAGCAGGGCAATTTAGAGAAAGATTGAGAGCTAGTGCTGACTCGCTGATGGAGAATGCATTAGTTATGTAACAAGTTGATACTAACGTTAGAATATTGATGCTATGTAGGTTCTGACTACCAAGATAGATGTTATTATAGTAACtctaataaatatttaaattgttCTTCCTATTCCATAAGTATTTTGTTTAACTGCATTAGTAGAGTTCAGGGAAATAAATGGAGAAATTTAATATTCAATTACCTTCAAATGCTCTTttactctggaaaaaaaatgaaaaagactcaaaaaaatagattagaaaaaatTTCACAGTTGTCATTACACAGTAAAAATACAACATACAAGTATTTATCATTAAACAACTTTGTCTTAACCATGAAACATGTTAATTACTTACTGGCATGGAGTTCTTTCTGTTAGTTACACATGTTAGCATTTATATGTACATGGCTTGATAACTTTTCCATGCCAGAGTTTCATGCCTTCATATTTCCCATAAGACCTCTCCTTACATTatatgaaatttgaatttgttaaagtgaatgcaaaacaaaacatgaaattaaTGATTAAATTCTGTGGGGTGATATTTCCATTCAGTAATAggtcacagatgatgtcaacagtggcacacgaggtgcaGTCAAGTCTGTCTCATTGTGGTGTCTTCTATGATCTATTACAGACTGTACAGAGCtgtggcaaaatggaatctatttgttttatgacTGATAaggaagcaaaatgttgttattgGTGACGTCATTTCTGTGTGTCTTCCAATATATTATGAGTGATAACCATTCAAAATGTGTGTACAGTTCAGCTGAACATATATTAATACCCTGTATAAGATTTAGTCACCCATTGCACTTCACCATAGTAAAGAATCACAACTTATCTGTTAAACATTCATAGTAATAATAATGCCTTATTACTCCTGGCAATTTATTTATGTGTAATTAGGGTCCATAGCTTTGAGGGTACTTTAGTTTCCTCCCTTGCACCAAGATATTCGAAGGAAATTACATTGTGCACCTCTTGAGAATTTGAGAATTGTATTTAATGCAAGAGTATAATTAATAGTTATTTTAAATTACTATGTGCTGAGTGTTAAAAATGTTAAGTTAAGAGTTTATTGGAGCTAGCCTAATGATCAGATAACTTATGGCTATTTGAATAGATCagatgtaaaatatattttaattgaaTCTAAAATAAAACGCATTGAAGAAGCAATAAAAGACCTTACTAAGGGGGAAAAcagatttgaaaacaaacaaagttgGTGTGAAATAATGTACTATTTTCCATGTTCTTTATTTCCAGGGGttattttccatacattttTGAAGTATAAGTGTTAAACTTTCATTAATGTTTATGTCAGCAATCGTGGGCAGAAGGCATAGGGGATTTAATTATTATacatatgattatttttttgtgaaaaacaaagcgTTTTTCTCTGTTCATGGTTGGGACTTCACTGTCTTATTTTTTATGCCAAGaagcaaataacaaataaatgcTGCATGACCAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01931 all species →	NTPase_I-T	Protein of unknown function DUF84	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029001 all species →	Homologous_superfamily	Inosine triphosphate pyrophosphatase-like	Interproscan
IPR026534 all species →	Family	Protein PRRC1	Interproscan
IPR026533 all species →	Domain	Non-canonical purine NTP phosphatase/PRRC1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23276 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0034199 all species →	Biological Process	activation of protein kinase A activity	Interproscan
GO:0034237 all species →	Molecular Function	protein kinase A regulatory subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_058941607.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.