Gene detail

Detailed information of XP_058942582.2 in Pocillopora verrucosa

Genomic Location: chr7:15831881...15840898
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059086599.2

ATTGCGGGCGCTAGGTTGAAGTGCAAAGAAACATGAATTTGGACCAAAATCATTCGTTTTCGATTAAAAAGACGAGCATCGTGTGATTTCAGTGAAAGGCAGAGGCAAAATTATGATTGATTCAAGCCATACCAGTCCATTTCCACCTCTGTTTGTCGCACAAGCCGGTCAACTTGAAATGTGATGGGGTTAAAGCCAAAGAACTTCATAGAAACAGCGCGTTCAGTTTACACTGAATATTCACCTGAGTCAAGTTACGAGGGGACGATGGCACGGCAAACTTTATTTCCGGCTAACTCTACTACTCCAGCTACACTTGGGCCTGGGATTTCAAGGCCAGCATATCTTGCTCTGACAATTGTTTTTACGACGCTCTacgctttgttattttttatgataGTGGTGCAACTCTGCCTGATCTTATACCACAAACATCGCCGTTTATCGTATCAAAGTGTGTTCTTGTTCATCTACCTGCTTTGGGCTGCGTTGAGAACTACgctgttttcattttacttcaaAAATAGTGCTCAAACAAACACATTTCATCGTTTTATACGGTGGTTCCTGTACGCATTTCCAATCTACTTACAGTTTCTTACCCTATCTCTGCTGACATTGTATTTGGCAAAGGTTGTCTTAAGGACCAGAAGAAGCACTCTTGAGCCTTTAACATTCAGGAAATACAACAGACTGTATCTTCCTAGTTCATTTGCTGCAgtgaatattgttttctttgctcttAACATTACAAGCTCTTTTGTGTGTCGTGAACAAGATGCTCACGACACACTAGTCATATCGCGGGTCGTGGTAAATGGACtgctgtttgttgttgttggtgttgttcTCTGTTTCTGCATTATTAAGatTACAAGAGCACCAGCTGTCAATGTTTTACTGGAGGGTCAGGGAGCAACAACCAGACAAGGTATACTACTGTGTGTGCTGGTAGTCCTACTCTATTTGTCTAGAGTAGTTTACAACCTAATTGCAGTCGCTGTACCTCATGACTTGTCTTCATTTGGCTATGGCTGGATTAATGTTTCTGATGAGGGTGAAATTAACTACAGAGATTCTTCATGTAATAGTTGCAACAAAGTTCATGACGAGATGCGCGATGTGGAGTTTATATCGTTTGGTGTTGTCTTAATTGTATGGGAGGTGTTACCAACCTCCATGGTTATATTATTTTTTCGAGTCAGGAGACCAAATATTGGAGACATGGGACCATCAGGTATAGCCTCACAGAGTGGTGACAAAAAGTCATATTTCTTTGACAATCCTCGAAGGTATGACTCGGACGAGGACCTGACAGAGTCACAAGGACAAGCCAGAGGTAGTCAGTACAACATACCAGGCGTACTTAGTCCCTCCGCTTCCAGTGGGAGCGTAAACAGACCACGGTCATCATATGGCTCCATATCAGCCGCGCGCAGTGGAAGTTTCCAGAGAAGTAACAGTTATTCTAAAGTTTATCTCCCGGGTACCACTCCTCCTACTCTCCCTACTTGGTCTGAAAACCAAGCAGGCTGGTCTGGTTACCAAGCTGACGGGTCTGGATTCAAGGCGGACGTTTTAGTTAAGCAAAACGAAGCATAGTGATTCATGGGCAACGAGTAAAGTTAGGGTCGATGACCTCAAAAGAATGAAGCAAACTTTGTTACATGGATGATCAAACGAAACGCTGGTAGAGGCTAGACCGTAATTCTTTGTCAGCACAGAGGGCTACGTACAAGACCTCTTGCCTCTTTACCAGTTATACAGGGTTTCACCCAGACATTAAAAATCTTACCTTCAGAAGTCCTTAATAGCCCTTTAAGCCGTTACAATAgctagcttctaatttctccatagaGTATCACTGTTGAATCAATCAGATGCGtcaagaggaaaaagaaaatgatggcCAAAAGAAGCACTAGATTATCAAACAAACGTCCTGGacagtaccataggaaatgtttacaaaaagaAGCAtgaagaatatacatactgtcgttagggtgtaaagggttattaagCGTACGGTGCACTGAAGGAGAATACCTCATGTGCGCTATTACATGATCCAGTCAACTGGAAAgccataatttttacttttcaaattaaacgGTTCAGACAAAAGATCtgggaattgccaaggaagaGATATCTCATTAGTTCACAAGAAGCCAAGAAAGTGTAATGTACAGTTTCGTCGTTTCATGTGGCTGCAGTGCCATTCAGTTGGATATACTTATCGCAGACGTTGTCACGTAGACATATTATTGTAGGATTTTCTAGgttttttgtcgtttttataatcatttttctctttgtttatttgtatgttttttttttttcgacttctTTGGCCTCGGGTCTAACTAACTTCAACATAAAATGTTGCCACAACTTCTGTAGTTGTCTTGGGCCGATTTGTAACTAACTGTTCTCGATCAAATTTAGTAAGTTaataccaatttttttataattctaTTTAATGAAAACTTCCCTTGATCTATTGTGCCAGAAAAGAAACGTTTATTCTTACATAGtcatatatattgtttttttttaataattgaaAGGAAGACCATTTTGCcaaatttagaaataaatttaaccaCACGGTACATAGTACCTTCATTTTG

Protein

Pfam domain

No Pfam domain signature was detected for XP_058942582.2. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR029723 all species →	Family	Integral membrane protein GPR137	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15146 all species →	INTEGRAL MEMBRANE PROTEIN GPR137	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:1904263 all species →	Biological Process	positive regulation of TORC1 signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22989	GPR137; integral membrane protein GPR137	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.