Gene detail

Detailed information of XP_058948282.2 in Pocillopora verrucosa

Genomic Location: chr10:11812689...11817992
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059092299.2

CATCAAATGACGACACATTCAACATTTTTGCAAGATGGCTGCGGTAGGGATACGAAGGTCCTTGCCGCTTATTCGACATTGTAGAGGTATTTGGCAAGCCAACAGgTCCTTGAGTTTGTGTTGTTGCCGGCTTTCTCCCGGTATTGAAGTTGTTTCGAGGAAGAAGATGAATAGTTCTCGTGAAGTAAACAAGCACGATTTAAGCGTAATCCCAAGGAGAACGTTAATAGGATCCATTATTCCGAATCCCCTCAATACGTCGCGGAGGAGAAAGTATTCCGAGAGGAGATTGCTTGGTTACTCAATGGAGGATATGTATGCAGTGGTATCAGATGTGGAGGATTATAGACATTTTGTCCCTTGGTGTAGGGACTCTACAATTGTGGCCAGAAAACCAGGCTTCCTTAAAGCTAAACTAGCTGTTGGTTTCCCACCTGTGGTTGAGAAGTATACATCTGTTGTATCTTTGGCCCCACCAAACCTAGTGAAGGCAGAGTGTACGGATGGAGAGATGTTTAATTATATGAAGACTATTTGGAAATTTAGTCAAGGTTTACCCGGAAATCCTAATACTTGTACATTGGACTTTTATgTTGAGTTTGAGTTTCGTTCAATCCTTCATTCTCAGCTTTCAACCATGTTCTTTGAcgaagttgttaaaaaaatggtGAAGGCATTTGAAAAGCGATGTTACTATCTCTACGGACCAGGCCACTTGCATAATAACAAATCTAGACCAGTACCAGCAGGAGCAAGATAACACAAGGCATATGGGTCAATTTCTCTATGTGCACTAAGATAGCTCATGTATGTCTTGTATGGTATCaacaaatattattatttacaaATACTATTTTCACTTTGGGATATAAAGCGAatatattattaattttttggatttcTAGGACCACAAGATCTTATAGAGTAAATTTTGCTGACGATACAATATTAAGTTGATGAAATTTTATTATGTGAAATATTGATTTAAGAATTTCATCTTTTCTATCAGTGCTTATCAACCTGTTGTGTCATTTTAACTGCCATTTTACTCTCAGGCCAAGCTGCGGTTTAGGATTTTACTAGTAATTTAGAATCACCATAGCAACTGTTAGTTATCAATAAGTGACAGTCTTTTTGgggtttgctttgttttaaatctGAAAGCTCTTTGTTCAAGACTCTCAAGAATCTAGACATGACCCCAATGGGCTAAgttgaaaaaatagaaaatatacATGTCTGAACTGATCATCACCATCTTCCTGATTTTTCTAGCACATCACCAAACATTTTAATCTGCAAACCTGCTTTTTCTATGGCATCATGCAACATTTCTATGTGAGTGAATGTGCATAGGTTAACAGCTGAACACTGCTGTTGTTGTCGTTTGTAAGGtgaaaaaagtggaaaaaaattattttatgaatattttctttgcttaCTCCCGTGGCTGATAATTAGTGAAATATAAAGGTATTTGAAGGAGCTGTTTTAcattctgaaaagaaaatgtaatttattttgttgaGTTGTGAGTGATAAAAACATATATGCATGATAAGGTCTCCTGTTTCTAGTGTCATTTAAATCATTAttaatactattattattaatactgataataatgatatttgataatattttaatattaatacTTATGACTGAATGTTACTCTGCTGGACTTAAGCTATGAATTAAGGTTGATATATATGATTTTGAATAGTGATAACATTATTATATTTACAAAGTGAGAAAAAAGGACCTATTTATTATAGCAGTGTGTAGTGTCCTGTGAATAACAAGAATCAGATAATCATTTGTCAATGTTAAGGTATATTACATTagttaaccccttaactcccacatcaaaattgtaattctccttactgtcaaccatacacatcttataaagttagttcagagaatttagtattggatccactaattatccccaaatttatatttttctttattctcgtcacttatctggttgatattgtactgatattctgaggagaaattctgtcttgatcacttgtgggagttaaagggttgaagagtTAACATTTTGTGGAATTTAGATTTCAGTGAGGATAAACTTGCTCAAAGATTTTCAAAGTAACAATCTTTAGGTAGATAATTAAAGTATCTCACAGGCTATGCACTTTGAATTGCTCTTAGGTAATCTATGTTTTCAGATGGTGAGCTgataattacagaaaaaaaattttgatcaagTAGTTAGATATAATCTTAGGACTATGGAACCCTCTTAAGGAATATGAGCAGCACAGGGATTATAATTTGTGATGCAGTCAGCCAGGTCCACCTTCACAACTGATCCCTGCAAAGTGTCAAAATGTCAGTTTACTGGGATGTAGCAAGGAAATTACAaatgggggggagggggggggagtcACACCTTATCACACCTAAGGTACCTACCTGACCGTTGTTTCAATATCCTTCCAGCTGTGTGGCATGTTTTTGAATGAGCAGTGAGCAATGCATGCAGTGTTTACTCTGGTATCTGTACTTTTTCCACATCTGAATTATACCATTTGTTTGTTCATGACAAAAACACATATTATCTTACAAAGAGGTCATGGACACACTTGGACCTTCCTCAAGCTCTGCCCCTGTAATTAGCTTGGCAATGCACTGATGGTTTAGCAGACGGTGAAAGCAAAtgattcaattgttttttgGATGAAGGATCAGCTGATGCTATACTGATGCTGATCCTTAAAGCTAGTGATTGTGGGCTGGTTCCCATATTTTGTACAAAGAGCGAAAAAACATTTACTATAATGAATGAACATAGTTGTGTCTGGAAATAAATAATATGCTGCACCTGGAGTTCAATAAAAAGTGTGATTCTTTTCAAAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03364 all species →	Polyketide_cyc	Polyketide cyclase / dehydrase and lipid transport	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044996 all species →	Family	Coenzyme Q-binding protein COQ10-like	Interproscan
IPR005031 all species →	Domain	Coenzyme Q-binding protein COQ10, START domain	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12901 all species →	SPERM PROTEIN HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045333 all species →	Biological Process	cellular respiration	Interproscan
GO:0048039 all species →	Molecular Function	ubiquinone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18588	COQ10; coenzyme Q-binding protein COQ10	-	Cofactor metabolism	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.