Gene detail

Detailed information of XP_058950010.2 in Pocillopora verrucosa

Genomic Location: chr8:19415911...19422099
NR annotation: no NCBI-NR hit recorded
Species abbreviation PVERR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059094027.2

GGCGCTCCCCACAATTTAATAGTACTTTCATGGCGGAAAGTCTAGTAAGGGTTTTCCTCCAGACGTAACACCGGAATAACGAATTTAAGCGGTCACCGTCCTTTCCTCGAGAGATTGTATACAAGCTTAAGCATTTCCCTTCTGTAAAATGGCATTAAATAGACAGGCAAGGAAAGTTTTTGGGCTACTTCAAAGAAGATGTATAAGACAGATCCATTTTAAGAGTCAAACTTCCTTTAAAGGGATATCAGCTCTTGGGGTGTGGAATGAGAGACTTGGATTTGGTATAGACAATGAAGGACAGGTTGTTCTTGTGGCACAAGCTTCTCAGCGAAGTGCTGATGGGTTTGATAACAACAAGCTTTATGGCCCTCCAGCTGCCCCAGAGCAAACCATTCGAACATCGGCAGTGAAAAAAGCATTTATTGACAAAGACCTCTGGAACCAGGGTCCTAGAATAACAGGAAATGCCCCCTGGGCTAGACCTCAGCTCCCTCGACGTGGTGGCTGTTCAGCAGGTTTCTCATCCCTTGCTGGTGATGGCCAAAGCAGTGGATCATCTTTCCCAGACTCAATGGACCCTTCCCTTGTGATATTTGACAAAGATGGTACTCTGATAGATCTGAATAATGTGTGGATTCCTTGGATGGAGAGTCATGTGCAGGAACTGGAAGAGGCAACTGGTCTTGATCTGGCTGATAAAATGTATGAAGAAGTGGGTTATTGTCCTAAGAAGCGCATCTACTCTGACGGAGGCTTGCTAGCCCATGCGACTGTTGCTGAAATCAGACAAGCATTTGTCACAGTGTTAATCAAGAGTGGTTTAGATAGAGCAAAAGCACAGAAGCTGGTTAGCAACTGCTGTAAAGATTTTGACAGTGGTGGGCATGATACCCTGGAGCCTCTGGGTGACCTCCCAGCAATTTTTGAAACTCTGAGGGCAAAGGGTGTTAAGACTGCAGTCTGTACAACTGACAGTCGAGAAGGCACTCTGTCAGCTCTTGACAGGTTAGGCCTCATGAGCATGATTGACAAAATTGTTTGTGGGGATGATACAGACATCAAACCAAAACCCAATCCTGAAACTGCCTTGGGCATTTGTGAAGAGTTAAATGTTTGTCCAACTCAAACTGTTATTGTTGGTGACACTATTGCCGACACCTCAATGGGTCGTTCTGCTGGGCTAGGTCTAACAATAGGTGTTCTTAGTGGGGCTGGCAACCAGAAATTTCTAGAAAAGGAGGCTGACATTGTTTTAAACAATGTGGATGAGCTTCTAAATACCTTATATCCATCAGactcatcatcttcatcatcctcCTCTTGATCTCAAAGTAAACAAACCTGCTTATATAATTTTTTGTGCAAGTCCTAGCTAATCTGTGTCTCATAATTTCCTTTCATACTCCCTGGCAATCAATATGATATGCAATTTTGGAAATGAGTTATCAATAGCAGTTGTAATTATTTGTTACATGGGAGAGTGAAGGAAGTTAAACTTTGCTCTAGTTCTAGAAAGCCTTTCTGTAACTAAAAGCACTAGCATCAAAGATTTAATATTGAAAAGTGTGTTTTTCAAGGTTCCCAATTACTACTTGTATCTGACAGTAACAAACAAACCCCTTAAATGTTGTTACATAAACATATACTGGACATGGTCAACTCATGAGAACAACATTGATTTGTAAATAGTCATAAGTGTATATTAAGCTTCCTCATCAgcctttttatttattacaatttgAACTTCTTAGTAGTTCAAGTGTGCTACAAATATGCGTTGGGCTCTCTTTGATGGTTATCTTTTGTAGTAAACTGAATTGTACAGGCTTGAATTTTATAGTGATGCACAACACCTTGATGGTGGTTTCTGCATATCTGAACTAGGTGGGGACTAATTGATAACAGATCGCTGAAGTTTAATCTCTGAGTAATACAATGAGAATGCATAACCTGATTTAaggaaaaggaatgaaaataaagaaaatactgTGTATTAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702 all species →	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR050155 all species →	Family	HAD-like hydrolase superfamily	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43434 all species →	PHOSPHOGLYCOLATE PHOSPHATASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_058950010.2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_058950010.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.