Gene detail

Detailed information of XP_058955173.2 in Pocillopora verrucosa

Genomic Location: chr2:855537...859753
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059099190.2

GGAACGCCTTGTAGTTGCTTTGCTGTGATAAacagttgaaaataattatgaccTTTTTATGCCTCAAGAGGtggtgttgttttgtttgtaagaGTCGTTTACGTGTTAAAAAAGGCTACTTACCGAAATGGCAAAGTTTTTCACATTACAGCGCTATGACTGGGAGttcaGCAGTTAATTTAGCTTATGAAAGTATAGATGCAACTACTGAAGGGGACGATTTACCACCTATAGTCATTTTACATGGCCTGTTTGGATCAAAAACAAACTGGAGAACACTGGCCAAGTTATTTAACAGGGAAACTGACAGAAAGGTAGTTACTGTTGATGCAAGAAATCATGGACAAAGTGATCATAGTCCAGACATGAACTACTTTGATCAGTCTCTGGATTTATGGcatttgtttcaaaaactggaactttcaaaagcaattttaatGGGTCACAGTATGGGAGGAAAAACTGCCATGACATTTGCTCTGTCTCATCCAGAGTTTGTGGACAGCCTTATAGTAGTAGACATGTCCCCTACAAAACTGTCTTTAGATGAGGATATTCCACGTTATCTTGCAACAAAGCGGGCTATGGATTTAAATCTCATCAAGGATAAGAAAGATGCTGAAAAGATGTTAATGGATGTTGTACCTAATGCATTCTTGAGGTCATTCTTTCTCACCAACCTTATAAAAAGTGCTGCTGGTTTTAAGTGGAGAATTAACCTTGAAGCCTTGGAGAATAACATATCTGAAGTTGCTGGCTTTCCATCAAATTTTCCTCACCAACAGTTTGAAGGAAAGACACTTTTTGTTGGTGGAGCTAAATCAGACTACATCCAgcaAGAGGAGTTTCCTGCAATTCGTAAACTGTTTCCCAAAGCAGACATTAAATTTATTCCTGATAGTGGTCACTGGCCTCATtcagaaaaaccaaaagaattTGCACAGACCGTGACAGAATTCCTAGATGAATGTTTACAAGATCATCATTAGCAATACTTGAAAGTACTAAAATGATCATTGTCACAAATACCCACAGGaacaattgcttttcattttttcctgtatATTTACACCTTTTTAGTAAGAGCTTCAACATAACATTCATatttatgaacattttttttaatatgcatACGAagtattttgtaaaaaaatatattattgcCACTGTAGGCTTAACTTTATCTTCAGTGTTTGATCAAGAATATTTAAATTCAGGTAATGCAATGACCAAAATTATTTGTGCTTGTTTCCAGTCAGAGTAATGAGATATAATGTTTTTATGCATATGAATAAAGCTCATTTGTCAAAATCAATTAATTGTAGTTGAACATGTATTAGCAAAGGCAGAACTCAAACCTGTCTAATccaaaaaggtgaaaattaccATTTATCTGCCAAATAATTCTCCATTGCTGTCAACGATTCTGGAATAAATATGATAAAAGTTTGAAGTAGGGGTAGGTCAATTTTCATGAGACTGGTGACTAATTAATggtcactgtaaagagtttgtaaagctgacaTTTTATGCATTGGTCCTTTGTCAGGAATTAGCATACAATCTCTCAATAAATTTGACTACACAATTCAAGACAGCAATTAGGAGCCATCAAGCTTGATTCAATTGATTTGGGTTTGCTGATAGAAATAGGATAAACAGCCCTTATACCATGTTTCCTTCTCCAATGAGTAATAAGGAGATGTCCAGGAAATGAACATATGCTGCCCCTACCCCCTCCTTCTTGAGAAGAATCAAGAAAATGGCAGAACTTTTTACACCCaacatcagtatttatattctccataatgtccTTTATACACTTcttaagatgctgacaaggagagaatttccagacatggagaatttgttaccTGTTTCTTGTAATAAATATGtgtcatttcatttttgtttcaaataattttattctttcagaTACAGAGCATTAAAACAACTTCCTTGGCAAGAACCCATTCTTGTAAATTAGCAAGAGTGTTTCTCAACAGCTGCAAAATTAATTTATCCACAACTGTGTCATGTACTCTTAAACACCTTCACAGCCTGGGATGACTTGAAAGTTGTTGTACTAAACACTTTGTCTTTCTTTGCATTTCTACCAATTTGTGCTGTAAATTATATcaattaaagaaatgtaaaatatttagCCTACATACCAGTAActaaattttgtcattttttcttgattgtGAAATATAAGGAAAAGAGTTTATGTGAGCATTTATAGCCACTTGAAAAACCTACACCCTACCCAAATTACTCTGCTCATTGGTAttggaagaaaatgaatttatagTTCAGTATGGTCTGTAACATCAtcttcctcatcatcatcatattctTCTGTTTCACCCTCTTCCAGCTCCTCTTCTTCCGGCTCTTCTGGCTCTTCCAGTTCCTCTGGCTCATCTGGCTCTTCAGGAACTTCACTCCTGGCTTCTGCTGACTTAGGCAATCCATGCTTTTCTAAGAGTTGGGATATTTCATCTGTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561 all species →	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073 all species →	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46118 all species →	PROTEIN ABHD11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0044255 all species →	Biological Process	obsolete cellular lipid metabolic process	Interproscan
GO:0052689 all species →	Molecular Function	carboxylic ester hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13703	ABHD11; abhydrolase domain-containing protein 11	-	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.