Gene detail

Detailed information of XP_058957153.2 in Pocillopora verrucosa

Genomic Location: chr14:2894501...2899531
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059101170.2

ggcaGGAAACAATAATGGCGCTAGAAACTGTGAGTTGCTTCTTTGATGGTTACCGGAAAAATGGAAAAGAGGGTGAAAATGCCTTGAAGTTAGTCCGAGagaacatttcaaactcaattAAGAGTTCCTCTTTAGGAAAGTATTCGAAATACTGTGATGTACCAGAAGACGAAATAAATAACTGGTTGGACTCTTTATTGGGGAAAGATCGTTTGAATGTggagcaaaaaaatgaaatacgaTGTCAGCTTTGTCAGTGTTTGAAGAGAATTGATGAAAAGTCTTGCATAGCTTTGTGGAAATACTGGCTTCGACCGgttacaAATCCCATATCAGCATTTCTTATTGTTGATGCTCAAAATGACTTCATGAGTGGGTCTCTGGCATTAAAGCACTGCCCTGCTGGTGAAGATGGTGAGGAAGTAGTGGCAGTGATAGAAGATCTGTTGTCTAAAAATCTATTTAAAGTTGTTGGTTACACATTTGACTGGCATCCACCAGATCATTGTTCCTTTATAGACAATGTGTCATTGTATCCTCTGCACTCCACTAGTCCTGTAAGTTCAGCACAAGCCAAACTATTTGATGTTGTGGTTTATGACAAACTTCCTCTCATCAATCAAATTTTGTGGCCAAGACACTGTGTTATAGACAGTTGGGGAGCTGAGCTCCACAATGGAATCAAGCCTCCTGGTAAAGATGATATCACAGTGAAGAAAGGAAGCAATCCCCGTATTGACAGCTATTCTGCATTTTGGGATAATGCAGACTGTGTCCAGACTTCGTTATTTGTTGATCTTCTCAAACGGGGTGTTACAGATGTCTACTTGTGTGGTTTAGCTTTTGATGTTTGTGTGAAACATTCAGCAATTGATGCTTTGGAGCAAGGGTTTAAAACTCATGTTATAGTGGATGGCTGTCGTGGAGTGTCACCTGATGGAATTGCGGAAACAAGGAAGGAGTTTTTAAAGAATGGAATTGTGCTAATTGAATCTAATAAGgtGGAAGATGCACTCAGGGACAAGAAAGAGCAAGGTCATAAAGTGGCATGAAAGTAATATCAGCAGGCAATTTCTGcttcataaatatttctttactttattttgataagtttttttatactttttttgtTACTAACTTATGGTGCAGATTCTGTCTGAATTACTAGGAGGACAGTCGGGTTTGGTTAAGAATTAAATTAATATTGGTGTGCAAGATTAAATTATATAGAGTCACGTTTTGCTTGAACAAAAGTTTTATGGCTCTTGTGTGTTGTTGTGTGAAGTTATTAGGCAAGACCAAGTCCAAATTTGACAGCAACTGTGCAATTTTTTAGTAATTTATATCTGATTTGAAGATAACAATCAACTGTACAGTTTATACCATGCTGGTCATGTTTTTCAgggactaaaaaaaaaaaggtggaaCAAATATGATTAATATATGCTACTTTTCAATTCATCAAATAGTTTTGCTGGTGCATGACTGGTTTAAATGCATCTAAATTAAATAAGCCTTGGCATAAACAAGGGAAATATCCAGTGATATTCCCATAGTGATATTCCTTAATTTTGAAACCATGTGTCTAATGTAATGGAAGTCTTACTTCCAAAGTTCATTCAAGTGGGGAGAGCATTTAACTGTTGTTGCAGTAGAAGGGAcctatttgttttttcaatacTTGTTTTTGATAGTATGATGACttgaatagttttttttgtgcactacaaaaaaaatatatgaaagataaataaaacattttaatatatTGCATATTTGTCCTAAGACAATAATTTTGGTAGAAATGAGCTTGATGAATACTACAAACTTGGAGGAAGAGAGAAAGTCCGAGGACAAATATCTGAACATAGTGTTGCAGTAAATGGAGGCTATTTTTTAATGTGATGTTGGCCATAGTAAATTGTACTCTGAGATACTAATTATGACTAAGGAGCTAATATTAAATGGGgtagtttgaaaatattgtagGTTTTGATTTTTGCAGATCAATCCTCAAACGTGTACCACCCCCCACAAAATAAATTACTGCCACAATGTCACTTCATAGTCACTGTATGTGGAATCAgtaaaaaccacaaaaaaccATCTACGCTATGCCTTCCTTATGAACCGATAAGGACAGTTCATATTTTCCTGTTAGGACAGAAAAtcacaaacaatttttatttcacaggaGAAATTCCAGTCACCTTGAGCTGCAAAAATTTGATCCTGCAAACCTAAGAAAAACTaacaatttacaaattaaaattcaaaacaactttTCTTAATACATTGTATGCTATATTTAACATTATTTATCATTGAATTGGTTGACTGGGTGAATGAGTGTTcagaataaaaattatttaatcagGGAATGATACATAAAATTGATAGACAATGTATACTCTCTGagtttattttttcagcttcaACACAGCTTCATGTAAAGTGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00857 all species →	Isochorismatase	Isochorismatase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036380 all species →	Homologous_superfamily	Isochorismatase-like superfamily	Interproscan
IPR000868 all species →	Domain	Isochorismatase-like	Interproscan
IPR052347 all species →	Family	Isochorismatase Family Nicotinamidases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11080 all species →	PYRAZINAMIDASE/NICOTINAMIDASE	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_058957153.2. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_058957153.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.