Gene detail

Detailed information of XP_058961046.2 in Pocillopora verrucosa

Genomic Location: chr8:856778...858958
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03641 all species →	Lysine_decarbox	Possible lysine decarboxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005269 all species →	Family	Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG	Interproscan
IPR031100 all species →	Family	LOG family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31223 all species →	LOG FAMILY PROTEIN YJL055W	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009691 all species →	Biological Process	cytokinin biosynthetic process	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016799 all species →	Molecular Function	hydrolase activity, hydrolyzing N-glycosyl compounds	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22522	LOG; cytokinin riboside 5'-monophosphate phosphoribohydrolase	EC:3.2.2.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.