Gene detail

Detailed information of XP_058961076.2 in Pocillopora verrucosa

Genomic Location: chr12:15588407...15604389
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC131788009

ATGGCCGAGGAGGTTATTGATCCTGGAATTGAAACTGAATATGAAGCAGTAGAAGAGATTTGTTATTGTAATGGCTTAAAGGGCAGCAATATGGTGCAGTGTGTTTTATGCCGACGCCTGTTTCATTTGGATTGCCTAAAGAATGGAAAACCCAGCACACTTGTGGGTGATGTGTTCTTTGATCTCACCTGTGCATCTTGTTCTACTGATAGCTCAGAGATTTGCACCAGACAACATTTAAGCTGGCTGCAAGCTGTGTACTTGACGTTGTACAATCTGTACTCTACAAGTAGAGGAAGAAAAGGTTACTTTAGATGGAGAGAAGACATCTGCCACTTCATTGACAAACACTGGCAGCTTTTGTTCCCCAACAAAAAAAAAAAGAACACTTGGAATAGCACAGTTGCTGGCATTTTGTCTTCAGGATGCCCTGAGTATTTCAAGTCAGGACAGAAGGAGTTTAACAAGGAAACTGGATGGTGGGGATTACAAGAGAACATTGCTCCATCAGTTAAATTGACTGGGACAGGGAGTGGTAGTTCACGCAAAAGAAGAGGACGTGCTGGTGTTGCTACAGGGTTTGGTGCAAAGAACAGGGAATCTCAGTTAACTACTGAAAAGTACCCAAGGATTCCAGTACAGCCTTTGTGTGCTGACGAAAATGTCATTGAGCTTTCAGTTTCTGAGCATAAAAGTCCATGTGATGATCTTATGGCCCAGTTATTATCGGAGGAGGATATGCGGGAACTTGCAGAACCTACACCAGAGATGGACGCGTTCACAAGTTTGTTCACGGCTGGTTACGAAGACATGGACGACACTTCTTCACTTTTCACTGGTGAAGAGGAAAAATCAGAATTAGACTTCCTTGATGAGAGAACTGACAGGCAGGAGGATACGGAATCTTTGTCGTCAACTGCTACTTCAGAGAAGTCATGTAAGCATTCGCAATCTGACTCGGTTCAGAGCGAGACCAAAGGCAAACCTGTTGCAAACAACCTTACAAGTCTTCCTCACACAATTGATAGTCTGGTTCCCGTGTCAGAAGAGAGAGAAAAGGAATTGCTGCTCAAGATCAACTCTTATCCTAAAGCAGTTTATCATGATCCCGTGGCGAGGAGATTTAGACGAAAATTAATATTGAGACAGATTAAAAGATCCAAGGGTTTGAAATTATTCGATCTGGACAAGACAGTTTCAGATGCTGTGACGTCAACCTTAAGATATCAGTTGACCAATGATGGTTTTGTCCCGATTGAGAATCGCGACATTGTGCCATCAGTTACTGAAGATAACTCGCAAAGAAAGCTTTACAAACAGAGAATTCTAAAGAAGTCTAATTCTTCTTCCTTTGGCATGACGGAAAATGTCCTTGATAGATTTTTGGCGGCTCCTCGCATGCTTCCCGGTTCTCGTCCCAGGACTTGCTCGTTCTTAACACGGCTGATTGGCGGTGATTCTCAAACACTGTACAGACCTATTACCAGTCCTTACACGTCCAGAATACTTAAGCCGTTTATCAGACGGGACTATGAAAGCCGGCCGTTGAAATTAAAACTGCTGCAAGAAATAATCGCTTATAGCCATAGGAATGATCCTGGGTGGAAGCCAACACAAGTTTCTCCCATTGATTACTGCTATGTACAGCCGCACCATATTCCATCCGTGAATGCAATGTGTCGGGAATTTTTCTGGCCAGGAATTGATTTGTCGGAGTGTCTCCAGTACCCTGATTTCAGTTGTGTAGTTCTTTATAAAAAATTCGTGATTGGTTTTGCGTTTATGGTTCCCGATGTAAACTATAACGAGGCTTACATCTCGTTCGTACTAGTCCATCCCGAGTGGCGCCGCGGAGGGATTGGAACCTATATGATTTATCACTTGATTCAAACGTGTATGGGGAAGGACGTCACACTTCATGTTTCCGTCACAAATCCAGCTATGCTTATGTATCAGAAGTTTGGGTTTAAACCCGAGGAATTAATACAGGAATTTTACAGTAGATATTTGCCTCAGGATAGTCCACAGTGTAGACATGCGTTTTTTCTAAGGTTGAGGAGGTGA

Transcript

rna-XM_059105093.2

CGAGATTTAAACATGGCCGAGGAGGTTATTGATCCTGGAATTGAAACTGAATATGAAGCAGTAGAAGAGATTTGTTATTGTAATGGCTTAAAGGGCAGCAATATGGTGCAGTGTGTTTTATGCCGACGCCTGTTTCATTTGGattgCCTAAAGAATGGAAAACCCAGCACACTTGTGGGTGATGTGTTCTTTGATCTCACCTGTGCATCTTGTTCTACTGATAGCTCAGAGATTTGCACCAGACAACATTTAAGCTGGCTGCAAGCTGTGTACTTGACGTTGTACAATCTGTACTCTACAAGTAGAGGAAGAAAAGGTTACTTTAGATGGAGAGAAGACATCTGCCACTTCATTGACAAACACTGGCAGCTTTTGTTCCCCAACAAaaaaaaaaagaacacttgGAATAGCACAGTTGCTGGCATTTTGTCTTCAGGATGCCCTGAGTATTTCAAGTCAGGACAGAAGGAGTTTAACAAGGAAACTGGATGGTGGGGATTACAAGAGAACATTGCTCCATCAGTTAAATTGACTGGGACAGGGAGTGGTAGTTCACGCAAAAGAAGAGGACGTGCTGGTGTTGCTACAGGGTTTGGTGCAAAGAACAGGGAATCTCAGTTAACTACTGAAAAGTACCCAAGGATTCCAGTACAGCCTTTGTGTGCTGACGAAAATGTCATTGAGCTTTCAGTTTCTGAGCATAAAAGTCCATGTGATGATCTTATGGCCCAGTTATTATCGGAGGAGGATATGCGGGAACTTGCAGAACCTACACCAGAGATGGACGCGTTCACAAGTTTGTTCACGGCTGGTTACGAAGACATGGACGACACTTCTTCACTTTTCACTGGTGAAGAGGAAAAATCAGAATTAGACTTCCTTGATGAGAGAACTGACAGGCAGGAGGATACGGAATCTTTGTCGTCAACTGCTACTTCAGAGAAGTCATGTAAGCATTCGCAATCTGACTCGGTTCAGAGCGAGACCAAAGGCAAACCTGTTGCAAACAACCTTACAAGTCTTCCTCACACAATTGATAGTCTGGTTCCCGTGTCAGAAGAGAGAGAAAAGGAATTGCTGCTCAAGATCAACTCTTATCCTAAAGCAGTTTATCATGATCCCGTGGCGAGGAGATTTAGACGAAAATTAATATTGAGACAGATTAAAAGATCCAAGGGTTTGAAATTATTCGATCTGGACAAGACAGTTTCAGATGCTGTGACGTCAACCTTAAGATATCAGTTGACCAATGATGGTTTTGTCCCGATTGAGAATCGCGACATTGTGCCATCAGTTACTGAAGATAACTCGCAAAGAAAGCTTTACAAACAGAGAATTCTAAAGAAGTCTAATTCTTCTTCCTTTGGCATGACGGAAAATGTCCTTGATAGATTTTTGGCGGCTCCTCGCATGCTTCCCGGTTCTCGTCCCAGGACTTGCTCGTTCTTAACACGGCTGATTGGCGGTGATTCTCAAACACTGTACAGACCTATTACCAGTCCTTACACGTCCAGAATACTTAAGCCGTTTATCAGACGGGACTATGAAAGCCGGCCGTTGAAATTAAAACTGCTGCaagaaataatcgcttataGCCATAGGAATGATCCTGGGTGGAAGCCAACACAAGTTTCTCCCATTGATTACTGCTATGTACAGCCGCACCATATTCCATCCGTGAATGCAATGTGTCGGGAATTTTTCTGGCCAGGAATTGATTTGTCGGAGTGTCTCCAGTACCCTGATTTCAGTTGTGTAGTTCTTTATAAaaaattcGTGATTGGTTTTGCGTTTATGGTTCCCGATGTAAACTATAACGAGGCTTACATCTCGTTCGTACTAGTCCATCCCGAGTGGCGCCGCGGAGGGATTGGAACCTATATGATTTATCACTTGATTCAAACGTGTATGGGGAAGGACGTCACACTTCATGTTTCCGTCACAAATCCAGCTATGCTTATGTATCAGAAGTTTGGGTTTAAACCCGAGGAATTAATACAGGAATTTTACAGTAGATATTTGCCTCAGGATAGTCCACAGTGTAGACATGCGTTTTTTCTAAGGTTGAGGAGGTGAACCTTTTCTCAATAGCTTCCTgctataaaatatattcatactcgaaggagaaatttctctttGGTCACTGTCTCGGTAGACCTTATTTCAAAAGATTTGACAGGGGAGGGGAAGTGAGGGTGTAAATTTCAATCAATGCCAGTCattgaaattttgcttttgtaTTATAAATATATTATCTGCTTGAGGCATGATGAAACACCTCTCTTTGTTGACTGGCTTAgacctctctctctctctttctctctcgcACTTATCAATTACCATCTTCACTTTGATGTATTTTAACGAAATTTCAGGTTTAAAACATTCATTAGATACCCCCAATCATTCAAGAGACATTATGAATGTACGAAACTACTGTACAAGAAAAAGTATGGCCTATGAGATGAATCCAGTGCAGCTAAGAACAGACAACAACCATTTTAGTGGTCTGGGTACCAGTTCTAAATCTTGGACCCCAGATTACCTAGAGTCCTCGGCACGCGGCCTCTACTGGTGATcctctacaaaaaaaatcatacgCACATTCACATATTTGTTTGCATTACATTGTATTTAAAACCTGTTTATTACAATAGGATTCTAGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00583 all species →	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182 all species →	Domain	GNAT domain	Interproscan
IPR016181 all species →	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR019786 all species →	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20916 all species →	CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016747 all species →	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0004402 all species →	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0016573 all species →	Biological Process	obsolete histone acetylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24537	KAT14; cysteine-rich protein 2-binding protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.