Detailed information of XP_058961926.2 in Pocillopora verrucosa

Genomic Location: chr1:18955247...18964093
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19036
all species →		Fuz_longin_1First Longin domain of FUZ, MON1 and HPS1DomainInterproscan
PF19037
all species →		Fuz_longin_2Second Longin domain of FUZ, MON1 and HPS1DomainInterproscan
PF19038
all species →		Fuz_longin_3Third Longin domain of FUZ, MON1 and HPS1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026053
all species →		FamilyBLOC-3 complex member HPS1Interproscan
IPR043972
all species →		DomainFUZ/MON1/HPS1, first Longin domainInterproscan
IPR043971
all species →		DomainFUZ/MON1/HPS1, second Longin domainInterproscan
IPR043970
all species →		DomainFUZ/MON1/HPS1, third Longin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12761
all species →		HERMANSKY-PUDLAK SYNDROME PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0031085
all species →		Cellular ComponentBLOC-3 complexInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20193HPS1; Hermansky-Pudlak syndrome 1 protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP