Gene detail

Detailed information of XP_058969411.2 in Pocillopora verrucosa

Genomic Location: chr6:26289704...26302035
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC131794850

ATGGAATACAGTCCTCAGTCCACAGCATCGTCTATTCCATTTGACTCCACCACAACACTCACCATGTCAATGGCAGATGAGCTTAAATCTCAACACAGGCAACTATTTAATCCTGTCACACCTGACGTTTCACCACCCGCACAGACTAGTAATGGGGGATTCCCTATAAGGGGTAAAGAAACAGGGTCAGTGTTAGAGGTAAGCAATATGACAAATGCAGATATTCAGGAAATGGAGCAAGTGAGAGAACACCTGCAACTGATGCTGCAGAACTGTAAAGGATTCACAGATCAAAGTGATTATGAACAAACTCCAAGAACAACTACAGACTGTGAAACACAAGAAAATGAAGGGGACAAAGAGTCTACTATAAGTGTGGAAACAACATCCTTGTTGCAGAGACTTCTTCCAAATTCTTCCCCTCTCTCTGAAATTCAGGTTCATTTTCAAACTCCTGAGCAAGGCGCATTATCTCATGATCAACATACCAGGCAGATGGTGTCATTTGCCAGTGACAGAAGGTTAAATGCAATTCCTACCAGTAAAGTCACCAATGAGAAAACACTTCTGTCTGAAAATTCCCTGCTTAGAGATCAGGTGGAGAAAGAGAGGTTTAGGAGAAAGCACTGTGAACAACAAATACAGGAACTTCATAGGAAGCTACTGGAAGCTCAGCAGCAGCTGGCTGTTGCAGTGTCCGCTGAGAGAAAAAAAGATGCTATGATTGAACAACTTGACAAGACTTTAGCTAAAGTTGTGGATGGCTGGAAAAAACATGAAAGTGAGAAGGTAGCCATTATCAACCAACTGAAAATAGAACAGGAAACTGCAGAGCAGTCTCAGCAAAGACAACAGGAGATGTTGCTCCAGTTTGAGAAAGAGCTGGCACAAGCTGTGGAGGCTTTGACTAAAGAACAGGAAAAAGCAGCTCAGGCTGAAAGAGAAAAACAATCACAGCTCAAGCAACAAAAGGAGGAAAGAAACAAGTTACTAGAATGCCTGTCAAATGAAAAAGAAGCTGTGTCACAAATGGAACAGGAGAAAATTCAACTCAGAAAAGAAAAAGAAGAAGCTGAAGAGAAATATGTTCAGACAGATGAGGCTTTGAAGGAGCACAAAAGAATCCTTGAAGAACTTCAATCAAAATTCAGCAGCCTGGAAGCAGAACATAATGATTCAATGGCCATGGAGAAGGAAAAGCTACGCAAGGAAATACAGAATACCAAGGATAGTCAAGTTGTCCTCGCCTCAGTTCAGAAAGAAGTACAGCATCTTGAGATGGAGCTTGATGCAAGTAACAGAGAAAAGGAGAGTTTGAAGATGGAGTTACGTTTGATGGAAGCCAAACATGAAGCAAATAGAACCAAAGAAGAGACTGAAAGGCAAGCTGAACTGGAAAGAGAGATGACTCAGCGGCTGGAAGAGATTCATGATCAAATGTCAAAAACAGAATCAGAATTAAGGGAATCACACAGAAAACAGCTTCTGGAGATGAGCAAGAAACACAAAGAAGAACTTGAACAGCAGTTGGGAAAATTTCATGAGGAGTTGAAAAAAAAGGAAATCAAGGTGAAGTCTACTACTGATGAATATGAAGAAAGAATCAGTACTTTCCAAGAAAAGATGGCTTCTCTCTCAAACTCAAGGCTTTACTTGGAGAAAGAAAGACAGATGCTGTCTGTGCGTCTACAGCAGATGATGCAGTCTCACTGTGAGGAAGCCATCAAGCTGTTGAATTCCAGTAGAACTTCATTGTCCCCTCTGTCTGGAACACAACAGCTTGTACACAATCAAAGCTCCTTTGCGAAGAATGTCAAGGAGTCAAACTCTGACTGGGAAAAAGACACAGGCTACCAGCCTGGTAAAGGACCAATCACAGCAGCTCTGTTTCAATCTTCACAAGTACATCAACACCAGCAGAAGATACCTGATGAAATCTCAGCAAATTATGTAACACCTAAATTAGCACATAATATCAGCCATGAAAGTTCTCAGACTGATAGTGGCATGTACTCAAAGAGTTATCTTAGCAACAATGGAGACATGGTTAGGCATGGGATGCTATCACATGACCAGTCTGCAAATCCAGACTTTTTTCCTCTTCACACTGTCAATGATGACAGGACTGTTATTGAGGGACAGTCTGTGATCAATGGAGATGCTTATGAAGACAGAGAAGAAACACTTCTCGAACAAGAACTAGATACAGACAACACATTACTATCAGTATTTCATCAAGACAACCATCTTCCTAGGAATGTCTCCCCTGCAGCTGTGACTGAGGATACCATAACAGAGAAACTTCAGCAGCAAGAATCACGCCAGGCAGAATTAAACCACTATGTGAAAATGCTTCTGCAAAGATCACCTGCAGATCAACCCTATAAGGAAAAAGATCACCTCCCTAATGGACTTAGGCTGATCCCTTCATCCAGTGATGTGCAAGACAGATACTCTAACTCTTCCTCAGAAGTAATTTCTCCCATTCATTCAGATGGTCAGTTTGAGCAACGACATCTGATGTCCTCATACCACCATTCATCCAAAGACTCAAGTTCACATTCCTATCAGGAAGTTAAACATAAAGCACACCCACCACAAGCTGCCTTCACAAAAACCACAGTCACACCAGGTACACGTAGCATTCCAAGCCAAGCCAGAGAAGATGTTGGTATTACAAGTCAGGTACCATTCCATGCACCACACACTCGAATAGGTCAAGTTGCACCTCACACACCACCCCGGAGAGAACGAGACAGTGATGACCATCCTCCTCTCCCAGGAGCATTAACTCCTCACCAAGTTGGTCAGCTGTCTAGAATGCTTGGACTATTTTCAGAACCTGGTCAGCCACAGATTACAGCTGAACAACTCTTTGCTTACCTCAGAAGAGTGCAGAACAACAACCCACTGGGTAACAGCCTCACAACATCAGCAGCATCAAGCCCAGTCAGTACCAAGGCCCACAGCACACATGAGCACCATGTACCGGGACATAGTGTAGGGAATTCTCCTTCCCAGGCTCTGCCAAAACAACACATGATAGCCAACAAGGCTAGAAGAAGTCTGGACACTAACTCTCACAAGAGACAGGGTCCTTCTGTTAGTGGTCTCCCTATTAATCCACCTGGAAGCCAGGTTACAAAATCTGCTGAGCAACCAGGCCTGACCAGAACTCACAAACAGCCTGTCAGACAAGTATCAAGTCTGGTGGGTCCTTCCCTTAGGAACCCAGCTGGGGTGCAAGACGGAACCAAGTCAGCAGCAAAAGTAGGACTACAAAGCAGAGAACCTAAGGCCAAATCTGCTGCTACAAAACAGACTAAGATCAGTGCTTGGAGATAG

Transcript

rna-XM_059113428.2

AATTCCTCGGTTTGTTTGTTCTTTACAACGGTCAGATGTTGCTTTGAAACTGACTTTCCTTACTTTTGTTTAGGTAATTACCTCCCCAGATCGATCACTGATCCCCATTATTTAGATCTTTCTTTGGTTCACCAATCCTCTTTTCTATAATGGAATACAGTCCTCAGTCCACAGCATCGTCTATTCCATTTGACTCCACCACAACACTCACCATGTCAATGGCAGATGAGCTTAAATCTCAACACAGGCAACTATTTAATCCTGTCACACCTGACGTTTCACCACCCGCACAGACTAGTAATGGGGGATTCCCTATAAGGGGTAAAGAAACAGGGTCAGTGTTAGAGGTAAGCAATATGACAAATGCAGATATTCAGGAAATGGAGCAAGTGAGAGAACACCTGCAACTGATGCTGCAGAACTGTAAAGGATTCACAGATCAAAGTGATTATGAACAAACTCCAAGAACAACTACAGactgtgaaacacaagaaaatgaagggGACAAAGAGTCTACTATAAGTGTGGAAACAACATCCTTGTTGCAGAGACTTCTTCCAAATTCTTCCCCTCTCTCTGAAATTCAGGTTCATTTTCAAACTCCTGAGCAAGGCGCATTATCTCATGATCAACATACCAGGCAGATGGTGTCATTTGCCAGTGACAGAAGGTTAAATGCAATTCCTACCAGTAAAGTCACCAATGAGAAAACACTTCTGTCTGAAAATTCCCTGCTTAGAGATCAGGTGGAGAAAGAGAGGTTTAGGAGAAAGCACTGTGAACAACAAATACAGGAACTTCATAGGAAGCTACTGGAAGCTCAGCAGCAGCTGGCTGTTGCAGTGTCcgctgagagaaaaaaagatgctATGATTGAACAACTTGACAAGACTTTAGCTAAAGTTGTGGATGGCTGGAAAAAACATGAAAGTGAGAAGGTAGCCATTATCAACCAACTGAAAATAGAACAGGAAACTGCAGAGCAGTCTCAGCAAAGACAACAGgagATGTTGCTCCAGTTTGAGAAAGAGCTGGCACAAGCTGTGGAGGCTTTGACTAAAGAACAGGAAAAAGCAGCTCAggctgaaagagaaaaacaatcacAGCTCAAGCAACAAAAGGAGGAAAGAAACAAGTTACTAGAATGCctgtcaaatgaaaaagaagctGTGTCACAAATGGAACAGGAGAAAATTCAactcagaaaagaaaaagaagaagctgAAGAGAAATATGTTCAGACAGATGAGGCTTTGAAGGAGcaCAAAAGAATCCTTGAAGAACTTCAATCAAAATTCAGCAGCCTGGAAGCAGAACATAATGATTCAATGGCCATGGAGAAGGAAAAGCTACGCAAGGAAATACAGAATACCAAGGATAGTCAAGTTGTCCTCGCCTCAGTTCAGAAAGAAGTACAGCATCTTGAGATGGAGCTTGATGCAAGTAACAGAGAAAAGgAGAGTTTGAAGATGGAGTTACGTTTGATGGAAGCCAAACATGAAGCAAATAGAACCAAAGAAGAGACTGAAAGGCAAGCTGAACTGGAAAGAGAGATGACTCAGCGGCTGGAAGAGATTCATGATCAAATGTCAAAAACAGAATCAGAATTAAGGGAATCACACAGAAAACAGCTTCTGGAGATGAGCAAGAAACACAAAGAAGAACTTGAACAGCAGTTGGGAAAATTTCATGAGgagttgaaaaaaaaggaaatcaaggTGAAGTCTACTACTGATGAATATGAAGAAAgAATCAGTACTTTCCAAGAAAAGATGGCTTCTCTCTCAAACTCAAGGCTTTACTTGGAGAAAGAAAGACAGATGCTGTCTGTGCGTCTACAGCAGATGATGCAGTCTCACTGTGAGGAAGCCATCAAGCTGTTGAATTCCAGTAGAACTTCATTGTCCCCTCTGTCTGGAACACAACAGctTGTACACAATCAAAGCTCCTTTGCGAAGAATGTCAAGGAGTCAAACTCTGACTGGGAAAAAGACACAGGCTACCAGCCTGGTAAAGGACCAATCACAGCAGCTCTGTTTCAATCTTCACAAGTACATCAACACCAGCAGAAGATACCTGATGAAATCTCAGCAAATTATGTAACACCTAAATTAGCACATAATATCAGCCATGAAAGTTCTCAGACTGATAGTGGCATGTACTCAAAGAGTTATCTTAGCAACAATGGAGACATGGTTAGGCATGGGATGCTATCACATGACCAGTCTGCAAATCCAGACTTTTTTCCTCTTCACACTGTCAATGATGACAGGACTGTTATTGAGGGACAGTCTGTGATCAATGGAGATGCTTATGAAGACAGAGAAGAAACACTTCTCGAACAAGAACTAGATACAGACAACACATTACTATCAGTATTTCATCAAGACAACCATCTTCCTAGGAATGTCTCCCCTGCAGCTGTGACTGAGGATACCATAACAGAGAAACTTCAGCAGCAAGAATCACGCCAGGCAGAATTAAACCACTATGTGAAAATGCTTCTGCAAAGATCACCTGCAGATCAACCCTATAAGGAAAAAGATCACCTCCCTAATGGACTTAGGCTGATCCCTTCATCCAGTGATGTGCAAGACAGATACTCTAACTCTTCCTCAGAAGTAATTTCTCCCATTCATTCAGATGGTCAGTTTGAGCAACGACATCTGATGTCCTCATACCACCATTCATCCAAAGACTCAAGTTCACATTCCTATCAGGAAGTTAAACATAAAGCACACCCACCACAAGCTGCCTTCACAAAAACCACAGTCACACCAGGTACACGTAGCATTCCAAGCCAAGCCAGAGAAGATGTTGGTATTACAAGTCAGGTACCATTCCATGCACCACACACTCGAATAGGTCAAGTTGCACCTCACACACCACCCCGGAGAGAACGAGACAGTGATGACCATCCTCCTCTCCCAGGAGCATTAACTCCTCACCAAGTTGGTCAGCTGTCTAGAATGCTTGGACTATTTTCAGAACCTGGTCAGCCACAGATTACAGCTGAACAACTCTTTGCTTACCTCAGAAGAGTGCAGAACAACAACCCACTGGGTAACAGCCTCACAACATCAGCAGCATCAAGCCCAGTCAGTACCAAGGCCCACAGCACACATGAGCACCATGTACCGGGACATAGTGTAGGGAATTCTCCTTCCCAGGCTCTGCCAAAACAACACATGATAGCCAACAAGGCTAGAAGAAGTCTGGACACTAACTCTCACAAGAGACAGGGTCCTTCTGTTAGTGGTCTCCCTATTAATCCACCTGGAAGCCAGGTTACAAAATCTGCTGAGCAACCAGGCCTGACCAGAACTCACAAACAGCCTGTCAGACAAGTATCAAGTCTGGTGGGTCCTTCCCTTAGGAACCCAGCTGGGGTGCAAGACGGAACCAAGTCAGCAGCAAAAGTAGGACTACAAAGCAGAGAACCTAAGGCCAAATCTGCTGCTACAAAACAGACTAAGATCAGTGCTTGGAGATAGGCTgatattgattattttatttattttctcacttGTCAATATGTTTTACGGAGCTAGGCAAATATagcttttattttataataaatcaTCATTTGAGATATCTTGTGATTAA

Protein

Pfam domain

No Pfam domain signature was detected for XP_058969411.2. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR038923 all species →	Family	Centrobin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34439 all species →	CENTROBIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007099 all species →	Biological Process	centriole replication	Interproscan
GO:0051299 all species →	Biological Process	centrosome separation	Interproscan
GO:1902017 all species →	Biological Process	regulation of cilium assembly	Interproscan
GO:1902410 all species →	Biological Process	mitotic cytokinetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16468	CNTROB; centrobin	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.