Gene detail

Detailed information of XP_058969413.2 in Pocillopora verrucosa

Genomic Location: chr11:12542187...12547861
NR annotation: no NCBI-NR hit recorded
Species Pocillopora verrucosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_059113430.2

TGACTTCATCCGGATGGATATCTCTTGTCAGGGCACTGATTACGATATTTCTCAGCTGTTGCACAGAGCGAAGTCACTCTTAGTTCTTCGTCGGTTTGATGATGTGTTGGAGGTATGCACGGGAGCCTTTGAACTTGTCTCGAAGAGGAGAGATGACTCTCACCTGTCCAACGATTTATTCAGGAATTCAGATCAATGGACACATTTTGCAGTTATTGGAATTCAAGCCTTTGCAGAAATAAACCAGTGTCAAAAAGCTATTACATTCACCACTAaagcatttgaacattttagaAAGTTTCCAACAGAAGCCTTGGAATTGTGTGTGTGTCTTCTTCTGAAAGCATCAAAGTACAAGGAGGCTGGGAAACTTGTTCAGGATTGGCTTTCTTGTGAAGATAATTTCTCTCAAGTTAAATATGTGAAAATAGCAGAAGTTTATGTCAAACATATTCTCTTTCCCCAACAATTGCATGAggagataaaatgttttctggAGACCAATCAAGTCATTCCTTCCAGTGAGAAACAGGTACTTTTCCAGTTCACAAAACCTTTTGCTGATGAGAAGGTTGAAAGGTGTAACACGTCACATGAGCTAACAGCCCCTGCTCAACTTCCAGCAGAACATAGTGTTGCCAATAGATGGCTAAGAGTGAGGGCAGTCGTACAAAAGCTTCAGAGCCTGTACCGGATCGTCCTCTTCCATCAGAAAACGAGGATTCTTGTGAGAATGattatccttttgtttttcatttactgCTTCATCTCAGCGAGTAGTTATCAAGGAGTGAACAAAGGTTCAGGAATATTCAGTCTGTGGCTTGCTGTGTTAAACGCTTGGAGAGCATTGATTAATCCTACTAAGTGATAAAACCCAACACTAGCAGGTATGAACTCGGGCGGAGACGAACGAGACGTACTTATGGACGTAAAACTCCAAGAGTGAAGGAAAAGTAGAGACTGGAGAACAAACTGACCAAACTGAAGTGCCTGAGCTTTATATGCTGCTTACacaaatatcttttaaaatcgATCAAAAGAAAGGCGAGTACCATGAGCCATCCATCTGAGGAAAATTTCTAAGGAATGCTGAGAGATATCGGATAATTTTTATTCAAGACGAGTGAGAAATCTCAAATCAATTGCAACGAACAAGGAGAAATTATCTCTCTTACAATCTGAACAAGAGCTGAAGTGGCTACAAACTGGAGCAGAATGTTTGAGGTTTAAATACATAAGGAAAGCAATCTTTGAAGTAGAGTTTAACTTCTGTTAGTTGAGCTCAGATTAACAAAAGGACTGTGACAATACTCTAGCTATTCTTCGGTGAAACTGTGTGTTGGTTTTCGTGCTTTGTAGGTGTCATGAGTATCCAAGAAAATAAAGAACCATGATACATTAACAGACCCCGAGTGTGAAGAAAGACGCGcagcaaacaacaacaaaagcgtTAAAACGAGATAATACAGCGATCAATACTGTCTAATGAAACATTAAATCGAACTCTATGTGAACACTGACGAGCTCGTGGTAAGTAACTCACGGTGATAAATGTTAAACAAACAGTTCgttaaggaaactgtaacagggCTTCAGGCAGTCGAGTTTTCTAAAAGATGTTTGTTGCATCTGCGCTTAAAACAAGACTAATGCTAGGTGTTTCTTCTCTTGGAAGACTACTGATGTTGCGATGAGATATTTATCTCAGTCTTACAGACACTTCATGTTGTTACGTTTCATTGGCTAAGGATGATGTAAGTCAAAGGCTAAAGTTCATTCCCAATGTGAGTCGGTTTTCTGTTGtcattaataaaagaaaaaataaacgaaaaaacatATCTTAAAACCATTCGGTGTCTGTGGGTAAggattttttaacattttcgaGCGTGATTGGTTGTAACtagcccgatttgagcactaataggacagtgtacttGTCATGCTTGTAACTAGACAGTGCAATAGGACAGTTGAACtatcatgcctgtgtaagtggacagcgAGCGTCATGATTGAGCTGTTGTCGCGCATTTCGCCGAATTAACAATTGTCTTTTTTCATGTGGAAAAGTATAACCGATATCTAGTTTAATTCTCAAATTTCGTCATAGCtttaattaattggtaacaagacttcgtgtcgtcccATTCTGTCTGAGGTCATACTCGTGAATAAGAAATCACACCTCCTCCTCGAGGTCGTTCGATTTTGTAATCACTTGTATAATgacagactgaattggactccactcagtcccaGTACCATTTTTAATAGATCTGTCTAATGCGAGTTTGTATGGAAGTAGTCTGTTAGGACGTCAACTGAAGTATTCATGATGAGTAGTGGTTTTAGTGCAGTAAGTAAAGAGCTTGTAAATCATATAAATTCCCCAGATTTTTACCCATTTTACAAGTAAACTCCAAATTTTTAAAGAGCTTGCAAAACAGGTTACGACATCGAATGAAATTACGACGCACGGGTATTCAGAAATAGTGTTTATTTACCGTTGGCTTCAAAACAGAGATTATGCAGTATACGTCTGAGTAATGTTAAATTCTTTGTACATCTGTTTCCCATCGGGAGTCGTCAAGTAATTGGAATGGAATAGATTAACAGATTACAGAAAGTTTACTCTTTGGCATTGTATTCAAATGctccaaatattttcattgtggAAACAAGAATCAAGAGCTTTTAAAACTTATATGTAGTATCGAGTTTTAGGGTTCatataaatgaaacaaaacttttgaag

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07163 all species →	Pex26	Pex26 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010797 all species →	Family	Peroxisome assembly protein 26	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16262 all species →	PEROXISOME ASSEMBLY PROTEIN 26	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:0016558 all species →	Biological Process	protein import into peroxisome matrix	Interproscan
GO:0044877 all species →	Molecular Function	protein-containing complex binding	Interproscan
GO:0045046 all species →	Biological Process	protein import into peroxisome membrane	Interproscan
GO:0051117 all species →	Molecular Function	ATPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_058969413.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.