Detailed information of XP_065645136.1 in Hydra vulgaris

Genomic Location: NC_088920.1:70336899...70389221
NR annotation: XP_047129846.1, ribonuclease H2 subunit B isoform X2 [Hydra vulgaris]
Species Hydra vulgaris · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006988 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09468
all species →		RNase_H2-Ydr279Ydr279p protein family (RNase H2 complex component) wHTH domainDomainInterproscan
PF17745
all species →		Ydr279_NYdr279p protein triple barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019024
all species →		DomainRibonuclease H2 subunit B, wHTH domainInterproscan
IPR041195
all species →		DomainRnh202, triple barrel domainInterproscan
IPR040456
all species →		FamilyRibonuclease H2 subunit BInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13383
all species →		RIBONUCLEASE H2 SUBUNIT BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0006401
all species →		Biological ProcessRNA catabolic processInterproscan
GO:0032299
all species →		Cellular Componentribonuclease H2 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10744RNASEH2B; ribonuclease H2 subunit B-DNA replication proteinsko03032deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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