Genomic Location: NC_088929.1:470915...521880
NR annotation: XP_047141910.1, pescadillo homolog [Hydra vulgaris]
Species abbreviation HVULG · all data for this species · gene families
| CDS |
| LOC100198384 |
| Transcript |
| rna-XM_065807025.1 |
| Protein |
| XP_065663097.1 |
| UniProt accession | Description |
|---|---|
| A7SWH1 | Pescadillo homolog OS=Nematostella vectensis OX=45351 GN=v1g194255 PE=3 SV=1 |
| Q7ZY69 | Pescadillo homolog OS=Xenopus laevis OX=8355 GN=pes1 PE=2 SV=1 |
| Q6DEV3 | Pescadillo homolog OS=Xenopus tropicalis OX=8364 GN=pes1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005829 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06732 all species → | Pescadillo_N | Pescadillo N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001357 all species → | Domain | BRCT domain | Interproscan |
| IPR010613 all species → | Family | Pescadillo | Interproscan |
| IPR036420 all species → | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12221 all species → | PESCADILLO - RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000463 all species → | Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0042254 all species → | Biological Process | ribosome biogenesis | Interproscan |
| GO:0070545 all species → | Cellular Component | PeBoW complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14843 | PES1, NOP7; pescadillo | - | Ribosome biogenesis | ko03009 | deepkoala |
